CCDC38 (coiled-coil domain containing 38)

2014-11-01 Affiliation

Identity

HGNC

CCDC38

LOCATION

12q23.1

LOCUSID

120935

ALIAS

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 120935
HGNC: 26843
Ensembl: ENSG00000165972

Variants:

dbSNP: 120935
ClinVar: 120935
TCGA: ENSG00000165972
COSMIC: CCDC38

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000165972	ENST00000344280	Q502W7
ENSG00000165972	ENST00000546386	F8VRK3
ENSG00000165972	ENST00000546803	F8VTU7
ENSG00000165972	ENST00000546947	F8VY05
ENSG00000165972	ENST00000549876	H0YHI1

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
24786987	2014	Whole exome re-sequencing implicates CCDC38 and cilia structure and function in resistance to smoking related airflow obstruction.	15

Citation

Dessen P

CCDC38 (coiled-coil domain containing 38)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61543/ccdc38-(coiled-coil-domain-containing-38)