CCDC90B (coiled-coil domain containing 90B)

2014-11-01  

Identity

HGNC
CCDC90B
LOCATION
11q14.1
LOCUSID
60492
ALIAS
MDS011,MDS025
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 60492
HGNC: 28108
Ensembl: ENSG00000137500

Variants:

dbSNP: 60492
ClinVar: 60492
TCGA: ENSG00000137500
COSMIC: CCDC90B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000137500ENST00000260054J3KN19
ENSG00000137500ENST00000455220Q9GZT6
ENSG00000137500ENST00000525503Q9GZT6
ENSG00000137500ENST00000526265E9PMQ7
ENSG00000137500ENST00000527025E9PNI8
ENSG00000137500ENST00000527495H0YF06
ENSG00000137500ENST00000528149E9PSG6
ENSG00000137500ENST00000529073E9PKQ5
ENSG00000137500ENST00000529312E9PNI8
ENSG00000137500ENST00000529611Q9GZT6
ENSG00000137500ENST00000529689Q9GZT6
ENSG00000137500ENST00000529745E9PRC2
ENSG00000137500ENST00000529856E9PMQ7
ENSG00000137500ENST00000533761H0YD95
ENSG00000137500ENST00000534753E9PPJ7

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
306128592019Characterization of MCU-Binding Proteins MCUR1 and CCDC90B - Representatives of a Protein Family Conserved in Prokaryotes and Eukaryotic Organelles.12
306128592019Characterization of MCU-Binding Proteins MCUR1 and CCDC90B - Representatives of a Protein Family Conserved in Prokaryotes and Eukaryotic Organelles.12
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.20
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.20

Citation

Dessen P

CCDC90B (coiled-coil domain containing 90B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61577/ccdc90b-(coiled-coil-domain-containing-90b)