CDHR1 (cadherin related family member 1)

2014-11-01  

Identity

HGNC
CDHR1
LOCATION
10q23.1
LOCUSID
92211
ALIAS
CORD15,PCDH21,PRCAD,RP65
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 92211
MIM: 609502
HGNC: 14550
Ensembl: ENSG00000148600

Variants:

dbSNP: 92211
ClinVar: 92211
TCGA: ENSG00000148600
COSMIC: CDHR1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000148600ENST00000332904Q96JP9
ENSG00000148600ENST00000372117A0A0A6YYA3
ENSG00000148600ENST00000622973A0A096LNP9
ENSG00000148600ENST00000623399A0A096LNV6
ENSG00000148600ENST00000623527Q96JP9
ENSG00000148600ENST00000623527F1T0L2
ENSG00000148600ENST00000624091A0A096LP91

Expression (GTEx)

0
50
100
150
200
250
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
retina
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
356273102022Clinical Phenotypes of CDHR1-Associated Retinal Dystrophies.2
356273102022Clinical Phenotypes of CDHR1-Associated Retinal Dystrophies.2
326810942021A clinical study of patients with novel CDHR1 genotypes associated with late-onset macular dystrophy.5
339642722021Deep phenotyping of the Cdhr1(-/-) mouse validates its use in pre-clinical studies for human CDHR1-associated retinal degeneration.3
342295352021A rare case of RGR/CDHR1 haplotype identified in Bulgarian patient with cone-rod dystrophy.1
326810942021A clinical study of patients with novel CDHR1 genotypes associated with late-onset macular dystrophy.5
339642722021Deep phenotyping of the Cdhr1(-/-) mouse validates its use in pre-clinical studies for human CDHR1-associated retinal degeneration.3
342295352021A rare case of RGR/CDHR1 haplotype identified in Bulgarian patient with cone-rod dystrophy.1
322779482020Identification of a novel homozygous nonsense mutation in the CDHR1 gene in a Chinese family with autosomal recessive retinitis pigmentosa.2
322779482020Identification of a novel homozygous nonsense mutation in the CDHR1 gene in a Chinese family with autosomal recessive retinitis pigmentosa.2
313871152019A Specific Macula-Predominant Retinal Phenotype Is Associated With the CDHR1 Variant c.783G>A, a Silent Mutation Leading to In-Frame Exon Skipping.9
313871152019A Specific Macula-Predominant Retinal Phenotype Is Associated With the CDHR1 Variant c.783G>A, a Silent Mutation Leading to In-Frame Exon Skipping.9
288858672018Clinical characteristics of recessive retinal degeneration due to mutations in the CDHR1 gene and a review of the literature.11
301603562018A novel, homozygous nonsense variant of the CDHR1 gene in a Chinese family causes autosomal recessive retinal dystrophy by NGS-based genetic diagnosis.14
288858672018Clinical characteristics of recessive retinal degeneration due to mutations in the CDHR1 gene and a review of the literature.11

Citation

Dessen P

CDHR1 (cadherin related family member 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61650/cdhr1-(cadherin-related-family-member-1)