CFAP36 (cilia and flagella associated protein 36)

2014-11-01  

Identity

HGNC
CFAP36
LOCATION
2p16.1
LOCUSID
112942
ALIAS
BARTL1,CCDC104

Other Information

Locus ID:

NCBI: 112942
HGNC: 30540
Ensembl: ENSG00000163001

Variants:

dbSNP: 112942
ClinVar: 112942
TCGA: ENSG00000163001
COSMIC: CFAP36

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000163001ENST00000339012Q96G28
ENSG00000163001ENST00000349456Q96G28
ENSG00000163001ENST00000403007B5MD16
ENSG00000163001ENST00000406691B5MC35
ENSG00000163001ENST00000407816B5MCA1

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
196806502010Antibody to CCDC104 is associated with a paraneoplastic antibody to CDR2 (anti-Yo).2
196806502010Antibody to CCDC104 is associated with a paraneoplastic antibody to CDR2 (anti-Yo).2

Citation

Dessen P

CFAP36 (cilia and flagella associated protein 36)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61754/cfap36-(cilia-and-flagella-associated-protein-36)