CHST3 (carbohydrate sulfotransferase 3)

2014-11-01  

Identity

HGNC
LOCATION
10q22.1
LOCUSID
ALIAS
C6ST,C6ST1,HSD
FUSION GENES

Other Information

Locus ID:

NCBI: 9469
MIM: 603799
HGNC: 1971
Ensembl: ENSG00000122863

Variants:

dbSNP: 9469
ClinVar: 9469
TCGA: ENSG00000122863
COSMIC: CHST3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000122863ENST00000373115Q7LGC8

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
50

Pathways

PathwaySourceExternal ID
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfateKEGGko00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfateKEGGhsa00532
MetabolismREACTOMER-HSA-1430728
Metabolism of carbohydratesREACTOMER-HSA-71387
Glycosaminoglycan metabolismREACTOMER-HSA-1630316
Chondroitin sulfate/dermatan sulfate metabolismREACTOMER-HSA-1793185
Chondroitin sulfate biosynthesisREACTOMER-HSA-2022870

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA445425Prostatic NeoplasmsDiseaseClinicalAnnotationassociatedPD20038957
PA449383docetaxelChemicalClinicalAnnotationassociatedPD20038957
PA451644thalidomideChemicalClinicalAnnotationassociatedPD20038957

References

Pubmed IDYearTitleCitations
378763632024Indian patients with CHST3-related chondrodysplasia with congenital joint dislocations.0
378763632024Indian patients with CHST3-related chondrodysplasia with congenital joint dislocations.0
371835732023CHST3-related skeletal dysplasia in 14 patients: Identification of 8 novel variants and further expansion of the phenotypic spectrum.0
376211322023Dampening HOTAIR sensitizes the gastric cancer cells to oxaliplatin through miR-195-5p and ABCG2 pathway.4
371835732023CHST3-related skeletal dysplasia in 14 patients: Identification of 8 novel variants and further expansion of the phenotypic spectrum.0
376211322023Dampening HOTAIR sensitizes the gastric cancer cells to oxaliplatin through miR-195-5p and ABCG2 pathway.4
360424622022Biallelic variants in CHST3 cause Spondyloepiphyseal dysplasia with joint dislocations in three Pakistani kindreds.1
360424622022Biallelic variants in CHST3 cause Spondyloepiphyseal dysplasia with joint dislocations in three Pakistani kindreds.1
334954902021Chondroitin 6-sulfate represses keratinocyte proliferation in mouse skin, which is associated with psoriasis.8
334954902021Chondroitin 6-sulfate represses keratinocyte proliferation in mouse skin, which is associated with psoriasis.8
318450052020Abnormal expression of chondroitin sulfate sulfotransferases in the articular cartilage of pediatric patients with Kashin-Beck disease.2
329200142020Lysophosphatidic acid receptor 5 transactivation of TGFBR1 stimulates the mRNA expression of proteoglycan synthesizing genes XYLT1 and CHST3.9
318450052020Abnormal expression of chondroitin sulfate sulfotransferases in the articular cartilage of pediatric patients with Kashin-Beck disease.2
329200142020Lysophosphatidic acid receptor 5 transactivation of TGFBR1 stimulates the mRNA expression of proteoglycan synthesizing genes XYLT1 and CHST3.9
301187972018CHST3 and CHST13 polymorphisms as predictors of bosentan-induced liver toxicity in Japanese patients with pulmonary arterial hypertension.3

Citation

Dessen P

CHST3 (carbohydrate sulfotransferase 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61822/chst3-(carbohydrate-sulfotransferase-3)