CLASRP (CLK4 associating serine/arginine rich protein)

2014-11-01  

Identity

HGNC
CLASRP
LOCATION
19q13.32
LOCUSID
11129
ALIAS
CLASP,SFRS16,SWAP2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 11129
MIM: 618532
HGNC: 17731
Ensembl: ENSG00000104859

Variants:

dbSNP: 11129
ClinVar: 11129
TCGA: ENSG00000104859
COSMIC: CLASRP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000104859ENST00000221455A0A0A0MQS2
ENSG00000104859ENST00000391952Q8N2M8
ENSG00000104859ENST00000391953Q8N2M8
ENSG00000104859ENST00000544944F5H0Q6
ENSG00000104859ENST00000587112K7EM61
ENSG00000104859ENST00000588936K7EKC9
ENSG00000104859ENST00000591410K7EKR8
ENSG00000104859ENST00000591904K7EP11

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
salivary gland
esophagus
stomach 2
duodenum
small intestine
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
308327152019A comparison of DNA methylation in newborn blood samples from infants with and without orofacial clefts.12
308327152019A comparison of DNA methylation in newborn blood samples from infants with and without orofacial clefts.12
197732792009Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity.9
197732792009Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity.9

Citation

Dessen P

CLASRP (CLK4 associating serine/arginine rich protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/61848/clasrp-(clk4-associating-serine-arginine-rich-protein)