Identity
HGNC
LOCATION
1q25.3
LOCUSID
ALIAS
C1orf17,ColGalT 2,GLT25D2
FUSION GENES
Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool
Other Information
Locus ID:
NCBI: 23127
MIM: 617533
HGNC: 16790
Ensembl: ENSG00000198756
Variants:
dbSNP: 23127
ClinVar: 23127
TCGA: ENSG00000198756
COSMIC: COLGALT2
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000198756 | ENST00000361927 | Q8IYK4 |
| ENSG00000198756 | ENST00000367520 | Q5SXQ3 |
| ENSG00000198756 | ENST00000367521 | Q5SXQ5 |
| ENSG00000198756 | ENST00000649786 | A0A3B3IT37 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 36538011 | 2023 | Mediation of the Same Epigenetic and Transcriptional Effect by Independent Osteoarthritis Risk-Conferring Alleles on a Shared Target Gene, COLGALT2. | 3 |
| 37208701 | 2023 | Osteoarthritis genetic risk acting on the galactosyltransferase gene COLGALT2 has opposing functional effects in articulating joint tissues. | 2 |
| 36538011 | 2023 | Mediation of the Same Epigenetic and Transcriptional Effect by Independent Osteoarthritis Risk-Conferring Alleles on a Shared Target Gene, COLGALT2. | 3 |
| 37208701 | 2023 | Osteoarthritis genetic risk acting on the galactosyltransferase gene COLGALT2 has opposing functional effects in articulating joint tissues. | 2 |
| 33760386 | 2021 | Genetic and Epigenetic Interplay Within a COLGALT2 Enhancer Associated With Osteoarthritis. | 18 |
| 33783989 | 2021 | COLGALT2 is overexpressed in ovarian cancer and interacts with PLOD3. | 7 |
| 33760386 | 2021 | Genetic and Epigenetic Interplay Within a COLGALT2 Enhancer Associated With Osteoarthritis. | 18 |
| 33783989 | 2021 | COLGALT2 is overexpressed in ovarian cancer and interacts with PLOD3. | 7 |
| 20379614 | 2010 | Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. | 78 |
| 20546612 | 2010 | The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature. | 28 |
| 20379614 | 2010 | Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. | 78 |
| 20546612 | 2010 | The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature. | 28 |
| 19075007 | 2009 | Core glycosylation of collagen is initiated by two beta(1-O)galactosyltransferases. | 60 |
| 19075007 | 2009 | Core glycosylation of collagen is initiated by two beta(1-O)galactosyltransferases. | 60 |
Citation
Dessen P
COLGALT2 (collagen beta(1-O)galactosyltransferase 2)
Atlas Genet Cytogenet Oncol Haematol. 2014-11-01
Online version: http://atlasgeneticsoncology.org/gene/62009/colgalt2-(collagen-beta(1-o)galactosyltransferase-2)
