CRISPLD2 (cysteine rich secretory protein LCCL domain containing 2)

2014-11-01  

Identity

HGNC
LOCATION
16q24.1
LOCUSID
ALIAS
CRISP11,LCRISP2,LGL1
FUSION GENES

Other Information

Locus ID:

NCBI: 83716
MIM: 612434
HGNC: 25248
Ensembl: ENSG00000103196

Variants:

dbSNP: 83716
ClinVar: 83716
TCGA: ENSG00000103196
COSMIC: CRISPLD2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000103196ENST00000262424Q9H0B8
ENSG00000103196ENST00000262424A0A140VK80
ENSG00000103196ENST00000563066H3BSZ9
ENSG00000103196ENST00000564567Q9H0B8
ENSG00000103196ENST00000566151H3BS62
ENSG00000103196ENST00000566165J3QKP2
ENSG00000103196ENST00000566789H3BTP0
ENSG00000103196ENST00000567845H3BTI0
ENSG00000103196ENST00000569090Q9H0B8

Expression (GTEx)

0
50
100
150
200

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Innate Immune SystemREACTOMER-HSA-168249
Neutrophil degranulationREACTOMER-HSA-6798695

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA198IL6GeneLiterature, MultilinkAnnotationassociated24926665
PA29841CXCL8GeneLiterature, MultilinkAnnotationassociated24926665
PA449247dexamethasoneChemicalLiterature, MultilinkAnnotationassociated24926665

References

Pubmed IDYearTitleCitations
370217962023Decreased CRISPLD2 expression impairs osteogenic differentiation of human mesenchymal stem cells during in vitro expansion.1
370217962023Decreased CRISPLD2 expression impairs osteogenic differentiation of human mesenchymal stem cells during in vitro expansion.1
346243162021Identification of Rac guanine nucleotide exchange factors promoting Lgl1 phosphorylation in glioblastoma.0
346243162021Identification of Rac guanine nucleotide exchange factors promoting Lgl1 phosphorylation in glioblastoma.0
315574672019Whole Genome Sequencing Identifies CRISPLD2 as a Lung Function Gene in Children With Asthma.4
315574672019Whole Genome Sequencing Identifies CRISPLD2 as a Lung Function Gene in Children With Asthma.4
294375152018Association Between CRISPLD2 Polymorphisms and the Risk of Nonsyndromic Clefts of the Lip and/or Palate: A Meta-analysis.6
298993702018Knockdown of Crispld2 in zebrafish identifies a novel network for nonsyndromic cleft lip with or without cleft palate candidate genes.10
294375152018Association Between CRISPLD2 Polymorphisms and the Risk of Nonsyndromic Clefts of the Lip and/or Palate: A Meta-analysis.6
298993702018Knockdown of Crispld2 in zebrafish identifies a novel network for nonsyndromic cleft lip with or without cleft palate candidate genes.10
273280682017Brazilian multicenter study of association between polymorphisms in CRISPLD2 and JARID2 and non-syndromic oral clefts.6
273280682017Brazilian multicenter study of association between polymorphisms in CRISPLD2 and JARID2 and non-syndromic oral clefts.6
266248002016HMGB1 induced inflammatory effect is blocked by CRISPLD2 via MiR155 in hepatic fibrogenesis.6
275977662016CRISPLD2 (LGL1) inhibits proinflammatory mediators in human fetal, adult, and COPD lung fibroblasts and epithelial cells.19
266248002016HMGB1 induced inflammatory effect is blocked by CRISPLD2 via MiR155 in hepatic fibrogenesis.6

Citation

Dessen P

CRISPLD2 (cysteine rich secretory protein LCCL domain containing 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/62091/crispld2-(cysteine-rich-secretory-protein-lccl-domain-containing-2)