EXOSC2 (exosome component 2)

2014-11-01  

Identity

HGNC
LOCATION
9q34.12
LOCUSID
ALIAS
RRP4,Rrp4p,SHRF,hRrp4p,p7
FUSION GENES

Other Information

Locus ID:

NCBI: 23404
MIM: 602238
HGNC: 17097
Ensembl: ENSG00000130713

Variants:

dbSNP: 23404
ClinVar: 23404
TCGA: ENSG00000130713
COSMIC: EXOSC2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000130713ENST00000372350A3KFL1
ENSG00000130713ENST00000372351Q13868
ENSG00000130713ENST00000372352A3KFL2
ENSG00000130713ENST00000372358Q13868
ENSG00000130713ENST00000495699A3KFL5
ENSG00000130713ENST00000546165Q13868

Expression (GTEx)

0
5
10
15
20
25
30
35

Pathways

PathwaySourceExternal ID
RNA degradationKEGGko03018
RNA degradationKEGGhsa03018
Exosome, archaeaKEGGhsa_M00390
Exosome, eukaryotesKEGGhsa_M00391
Exosome, archaeaKEGGM00390
Exosome, eukaryotesKEGGM00391
Metabolism of proteinsREACTOMER-HSA-392499
Unfolded Protein Response (UPR)REACTOMER-HSA-381119
PERK regulates gene expressionREACTOMER-HSA-381042
ATF4 activates genesREACTOMER-HSA-380994
Gene ExpressionREACTOMER-HSA-74160
Deadenylation-dependent mRNA decayREACTOMER-HSA-429914
mRNA decay by 3' to 5' exoribonucleaseREACTOMER-HSA-429958
Regulation of mRNA stability by proteins that bind AU-rich elementsREACTOMER-HSA-450531
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNAREACTOMER-HSA-450385
Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNAREACTOMER-HSA-450513
KSRP (KHSRP) binds and destabilizes mRNAREACTOMER-HSA-450604
rRNA processingREACTOMER-HSA-72312
Major pathway of rRNA processing in the nucleolus and cytosolREACTOMER-HSA-6791226
rRNA processing in the nucleus and cytosolREACTOMER-HSA-8868773

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
362414252023Low expression of EXOSC2 protects against clinical COVID-19 and impedes SARS-CoV-2 replication.4
362414252023Low expression of EXOSC2 protects against clinical COVID-19 and impedes SARS-CoV-2 replication.4
341627422021A budding yeast model for human disease mutations in the EXOSC2 cap subunit of the RNA exosome complex.3
341627422021A budding yeast model for human disease mutations in the EXOSC2 cap subunit of the RNA exosome complex.3
316284672020Genetic and genomic studies of pathogenic EXOSC2 mutations in the newly described disease SHRF implicate the autophagy pathway in disease pathogenesis.14
316284672020Genetic and genomic studies of pathogenic EXOSC2 mutations in the newly described disease SHRF implicate the autophagy pathway in disease pathogenesis.14
268434892016Mutations in EXOSC2 are associated with a novel syndrome characterised by retinitis pigmentosa, progressive hearing loss, premature ageing, short stature, mild intellectual disability and distinctive gestalt.43
268434892016Mutations in EXOSC2 are associated with a novel syndrome characterised by retinitis pigmentosa, progressive hearing loss, premature ageing, short stature, mild intellectual disability and distinctive gestalt.43
175455632007Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways.48
175455632007Human cell growth requires a functional cytoplasmic exosome, which is involved in various mRNA decay pathways.48
124192562002Protein-protein interactions between human exosome components support the assembly of RNase PH-type subunits into a six-membered PNPase-like ring.28
124192562002Protein-protein interactions between human exosome components support the assembly of RNase PH-type subunits into a six-membered PNPase-like ring.28

Citation

Dessen P

EXOSC2 (exosome component 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/62950/exosc2-(exosome-component-2)