FAM118A (family with sequence similarity 118 member A)

2014-11-01  

Identity

HGNC
FAM118A
LOCATION
22q13.31
LOCUSID
55007
ALIAS
C22orf8
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55007
HGNC: 1313
Ensembl: ENSG00000100376

Variants:

dbSNP: 55007
ClinVar: 55007
TCGA: ENSG00000100376
COSMIC: FAM118A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100376ENST00000216214Q9NWS6
ENSG00000100376ENST00000216214A0A024R4V3
ENSG00000100376ENST00000405673B0QY29
ENSG00000100376ENST00000424557B0QY26
ENSG00000100376ENST00000427777B0QY28
ENSG00000100376ENST00000441876Q9NWS6
ENSG00000100376ENST00000441876A0A024R4V3
ENSG00000100376ENST00000452238B0QY27

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
196805422009Tissue effect on genetic control of transcript isoform variation.38
196805422009Tissue effect on genetic control of transcript isoform variation.38

Citation

Dessen P

FAM118A (family with sequence similarity 118 member A)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/63000/fam118a-(family-with-sequence-similarity-118-member-a)