GALNT15 (polypeptide N-acetylgalactosaminyltransferase 15)

2014-11-01  

Identity

HGNC
GALNT15
LOCATION
3p25.1
LOCUSID
117248
ALIAS
GALNACT15,GALNT13,GALNT7,GALNTL2,PIH5,pp-GalNAc-T15
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 117248
MIM: 615131
HGNC: 21531
Ensembl: ENSG00000131386

Variants:

dbSNP: 117248
ClinVar: 117248
TCGA: ENSG00000131386
COSMIC: GALNT15

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000131386ENST00000339732Q8N3T1
ENSG00000131386ENST00000430410H7BZD6
ENSG00000131386ENST00000437509C9JGI4
ENSG00000131386ENST00000617544Q4G146
ENSG00000131386ENST00000650034A0A3B3IRY6

Expression (GTEx)

0
50
100
150
200
250
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Mucin type O-glycan biosynthesisKEGGko00512
Mucin type O-glycan biosynthesisKEGGhsa00512
Metabolic pathwaysKEGGhsa01100
O-glycan biosynthesis, mucin type coreKEGGhsa_M00056
O-glycan biosynthesis, mucin type coreKEGGM00056
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
O-linked glycosylationREACTOMER-HSA-5173105
O-linked glycosylation of mucinsREACTOMER-HSA-913709

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
208006032010Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study.14
208006032010Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study.14

Citation

Dessen P

GALNT15 (polypeptide N-acetylgalactosaminyltransferase 15)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/63685/galnt15-(polypeptide-n-acetylgalactosaminyltransferase-15)