GALNT9 (polypeptide N-acetylgalactosaminyltransferase 9)

2014-11-01  

Identity

HGNC
GALNT9
LOCATION
12q24.33
LOCUSID
50614
ALIAS
GALNAC-T9,GALNACT9
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 50614
MIM: 606251
HGNC: 4131
Ensembl: ENSG00000182870

Variants:

dbSNP: 50614
ClinVar: 50614
TCGA: ENSG00000182870
COSMIC: GALNT9

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000182870ENST00000328957J3KNN1
ENSG00000182870ENST00000397325Q9HCQ5
ENSG00000182870ENST00000411988H3BM10
ENSG00000182870ENST00000538356F5H557
ENSG00000182870ENST00000541995Q9HCQ5
ENSG00000182870ENST00000542942F5H317

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Mucin type O-glycan biosynthesisKEGGko00512
Mucin type O-glycan biosynthesisKEGGhsa00512
Metabolic pathwaysKEGGhsa01100
O-glycan biosynthesis, mucin type coreKEGGhsa_M00056
O-glycan biosynthesis, mucin type coreKEGGM00056
Metabolism of proteinsREACTOMER-HSA-392499
Post-translational protein modificationREACTOMER-HSA-597592
O-linked glycosylationREACTOMER-HSA-5173105
O-linked glycosylation of mucinsREACTOMER-HSA-913709

References

Pubmed IDYearTitleCitations
231362452013GALNT9 gene expression is a prognostic marker in neuroblastoma patients.29
231362452013GALNT9 gene expression is a prognostic marker in neuroblastoma patients.29

Citation

Dessen P

GALNT9 (polypeptide N-acetylgalactosaminyltransferase 9)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/63690/galnt9-(polypeptide-n-acetylgalactosaminyltransferase-9)