GPATCH2L (G-patch domain containing 2 like)

2014-11-01  

Identity

HGNC
GPATCH2L
LOCATION
14q24.3
LOCUSID
55668
ALIAS
C14orf118

Other Information

Locus ID:

NCBI: 55668
HGNC: 20210
Ensembl: ENSG00000089916

Variants:

dbSNP: 55668
ClinVar: 55668
TCGA: ENSG00000089916
COSMIC: GPATCH2L

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000089916ENST00000261530Q9NWQ4
ENSG00000089916ENST00000261530A0A024R6E4
ENSG00000089916ENST00000312858Q9NWQ4
ENSG00000089916ENST00000312858A0A024R6J0
ENSG00000089916ENST00000553588G3V4L1
ENSG00000089916ENST00000554375G3V553
ENSG00000089916ENST00000554799G3V3M4
ENSG00000089916ENST00000556109G3V290
ENSG00000089916ENST00000556372G3V4I8
ENSG00000089916ENST00000556663Q9NWQ4
ENSG00000089916ENST00000557263Q9NWQ4
ENSG00000089916ENST00000557542G3V5D0
ENSG00000089916ENST00000621494Q9NWQ4
ENSG00000089916ENST00000621494A0A024R6J0

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
374386032023N6-methyladenosine hypomethylation of circGPATCH2L regulates DNA damage and apoptosis through TRIM28 in intervertebral disc degeneration.2
374386032023N6-methyladenosine hypomethylation of circGPATCH2L regulates DNA damage and apoptosis through TRIM28 in intervertebral disc degeneration.2
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78

Citation

Dessen P

GPATCH2L (G-patch domain containing 2 like)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/63925/gene-explorer/case-report-explorer/