HOXC12 (homeobox C12)

2014-11-01  

Identity

HGNC
HOXC12
LOCATION
12q13.13
LOCUSID
3228
ALIAS
HOC3F,HOX3,HOX3F
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 3228
MIM: 142975
HGNC: 5124
Ensembl: ENSG00000123407

Variants:

dbSNP: 3228
ClinVar: 3228
TCGA: ENSG00000123407
COSMIC: HOXC12

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000123407ENST00000243103P31275

Expression (GTEx)

0
1
2
3
4
5
6
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
267298202016Deletions of 5' HOXC genes are associated with lower extremity malformations, including clubfoot and vertical talus.17
267298202016Deletions of 5' HOXC genes are associated with lower extremity malformations, including clubfoot and vertical talus.17

Citation

Dessen P

HOXC12 (homeobox C12)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64395/hoxc12-(homeobox-c12)