HS3ST4 (heparan sulfate-glucosamine 3-sulfotransferase 4)

2014-11-01  

Identity

HGNC
HS3ST4
LOCATION
16p12.1
LOCUSID
9951
ALIAS
3-OST-4,30ST4,3OST4,h3-OST-4
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 9951
MIM: 604059
HGNC: 5200
Ensembl: ENSG00000182601

Variants:

dbSNP: 9951
ClinVar: 9951
TCGA: ENSG00000182601
COSMIC: HS3ST4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000182601ENST00000331351Q9Y661

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
MetabolismREACTOMER-HSA-1430728
Metabolism of carbohydratesREACTOMER-HSA-71387
Glycosaminoglycan metabolismREACTOMER-HSA-1630316
Heparan sulfate/heparin (HS-GAG) metabolismREACTOMER-HSA-1638091
HS-GAG biosynthesisREACTOMER-HSA-2022928

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
256489632015Genome-wide studies of verbal declarative memory in nondemented older people: the Cohorts for Heart and Aging Research in Genomic Epidemiology consortium.20
174824502007The principal neuronal gD-type 3-O-sulfotransferases and their products in central and peripheral nervous system tissues.18
187573722008Tetrasulfated disaccharide unit in heparan sulfate: enzymatic formation and tissue distribution.17

Citation

Dessen P

HS3ST4 (heparan sulfate-glucosamine 3-sulfotransferase 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64429/hs3st4-(heparan-sulfate-glucosamine-3-sulfotransferase-4)