IQCJ-SCHIP1 (IQCJ-SCHIP1 readthrough)

2014-11-01  

Identity

HGNC
IQCJ-SCHIP1
LOCATION
3q25.32
LOCUSID
100505385
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 100505385
HGNC: 38842
Ensembl: ENSG00000283154

Variants:

dbSNP: 100505385
ClinVar: 100505385
TCGA: ENSG00000283154
COSMIC: IQCJ-SCHIP1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000283154ENST00000460298C9J366
ENSG00000283154ENST00000485419B3KU38
ENSG00000283154ENST00000638311A0A1W2PR78
ENSG00000283154ENST00000639298A0A1W2PPY3
ENSG00000283154ENST00000639448A0A1W2PR91
ENSG00000283154ENST00000639631A0A1W2PP08
ENSG00000283154ENST00000639979A0A1W2PRV6
ENSG00000283154ENST00000640015A0A1W2PRY4
ENSG00000283154ENST00000640565A0A1W2PQT1

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

IQCJ-SCHIP1 (IQCJ-SCHIP1 readthrough)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/64657/tumors-explorer/