LARP1B (La ribonucleoprotein 1B)

2014-11-01  

Identity

HGNC
LARP1B
LOCATION
4q28.2
LOCUSID
55132
ALIAS
LARP2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55132
HGNC: 24704
Ensembl: ENSG00000138709

Variants:

dbSNP: 55132
ClinVar: 55132
TCGA: ENSG00000138709
COSMIC: LARP1B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000138709ENST00000326639Q659C4
ENSG00000138709ENST00000394288Q659C4
ENSG00000138709ENST00000432347G3V0E9
ENSG00000138709ENST00000507259H0Y9B4
ENSG00000138709ENST00000507377H0Y9K3
ENSG00000138709ENST00000508819D6RJB0
ENSG00000138709ENST00000512292D6R9W6
ENSG00000138709ENST00000648358A0A3B3IT29
ENSG00000138709ENST00000649983A0A3B3ISF0
ENSG00000138709ENST00000650359A0A3B3ISF8

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
223276452012Hypermethylation of the gene LARP2 for noninvasive prenatal diagnosis of β-thalassemia based on DNA methylation profile.1
223276452012Hypermethylation of the gene LARP2 for noninvasive prenatal diagnosis of β-thalassemia based on DNA methylation profile.1
120451012002The La protein.202
120451012002The La protein.202

Citation

Dessen P

LARP1B (La ribonucleoprotein 1B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/65175/larp1b-(la-ribonucleoprotein-1b)