LRRC36 (leucine rich repeat containing 36)

2014-11-01  

Identity

HGNC
LRRC36
LOCATION
16q22.1
LOCUSID
55282
ALIAS
RORBP70,XLHSRF2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 55282
HGNC: 25615
Ensembl: ENSG00000159708

Variants:

dbSNP: 55282
ClinVar: 55282
TCGA: ENSG00000159708
COSMIC: LRRC36

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000159708ENST00000329956Q1X8D7
ENSG00000159708ENST00000435835Q1X8D7
ENSG00000159708ENST00000561821H3BS33
ENSG00000159708ENST00000561948H3BRP7
ENSG00000159708ENST00000563189Q1X8D7
ENSG00000159708ENST00000565019J3QSG3
ENSG00000159708ENST00000567211H3BS33
ENSG00000159708ENST00000567723H3BQI9
ENSG00000159708ENST00000567823H3BRB2
ENSG00000159708ENST00000568010H3BNV0
ENSG00000159708ENST00000568804J3QRT0
ENSG00000159708ENST00000569499H3BSQ6
ENSG00000159708ENST00000569552H3BS33
ENSG00000159708ENST00000570075H3BND7

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

LRRC36 (leucine rich repeat containing 36)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/68613/lrrc36-(leucine-rich-repeat-containing-36)