MSANTD2 (Myb/SANT DNA binding domain containing 2)

2014-11-01  

Identity

HGNC
MSANTD2
LOCATION
11q24.2
LOCUSID
79684
ALIAS
C11orf61

Other Information

Locus ID:

NCBI: 79684
HGNC: 26266
Ensembl: ENSG00000120458

Variants:

dbSNP: 79684
ClinVar: 79684
TCGA: ENSG00000120458
COSMIC: MSANTD2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000120458ENST00000239614Q6P1R3
ENSG00000120458ENST00000374979Q6P1R3
ENSG00000120458ENST00000524950B4E1M0
ENSG00000120458ENST00000526629Q6P1R3
ENSG00000120458ENST00000527140E9PPE2

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
50
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
372119172023LncRNA BCLET variant confers bladder cancer susceptibility through alternative splicing of MSANTD2 exon 1.2
372119172023LncRNA BCLET variant confers bladder cancer susceptibility through alternative splicing of MSANTD2 exon 1.2
192400612009Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.94
192400612009Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.94

Citation

Dessen P

MSANTD2 (Myb/SANT DNA binding domain containing 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/70513/msantd2-(myb-sant-dna-binding-domain-containing-2)