NCLN (nicalin)

2014-11-01  

Identity

HGNC
NCLN
LOCATION
19p13.3
LOCUSID
56926
ALIAS
NET59
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 56926
MIM: 609156
HGNC: 26923
Ensembl: ENSG00000125912

Variants:

dbSNP: 56926
ClinVar: 56926
TCGA: ENSG00000125912
COSMIC: NCLN

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000125912ENST00000246117Q969V3
ENSG00000125912ENST00000586904K7EQ66
ENSG00000125912ENST00000587740A0A0C4DGP7
ENSG00000125912ENST00000588428K7ENM2
ENSG00000125912ENST00000590671K7EMW4
ENSG00000125912ENST00000592235K7EN96
ENSG00000125912ENST00000592737K7ELZ9

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
329142612021Identification of the soluble EphA7-interacting protein Nicalin as a regulator of EphA7 expression.0
329142612021Identification of the soluble EphA7-interacting protein Nicalin as a regulator of EphA7 expression.0

Citation

Dessen P

NCLN (nicalin)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/70740/ncln-(nicalin)