NEUROD6 (neuronal differentiation 6)

2014-11-01  

Identity

HGNC
NEUROD6
LOCATION
7p14.3
LOCUSID
63974
ALIAS
Atoh2,MATH2,Math-2,NEX1M,Nex1,bHLHa2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 63974
MIM: 611513
HGNC: 13804
Ensembl: ENSG00000164600

Variants:

dbSNP: 63974
ClinVar: 63974
TCGA: ENSG00000164600
COSMIC: NEUROD6

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000164600ENST00000297142Q96NK8
ENSG00000164600ENST00000297142A0A090N7T3

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
263950742015Leveraging existing data sets to generate new insights into Alzheimer's disease biology in specific patient subsets.10
263950742015Leveraging existing data sets to generate new insights into Alzheimer's disease biology in specific patient subsets.10
255484272014RNA-Seq data mining: downregulation of NeuroD6 serves as a possible biomarker for alzheimer's disease brains.23
255484272014RNA-Seq data mining: downregulation of NeuroD6 serves as a possible biomarker for alzheimer's disease brains.23
197338382009Case-control study of six genes asymmetrically expressed in the two cerebral hemispheres: association of BAIAP2 with attention-deficit/hyperactivity disorder.0
197338382009Case-control study of six genes asymmetrically expressed in the two cerebral hemispheres: association of BAIAP2 with attention-deficit/hyperactivity disorder.0
123570742002Cloning, chromosome localization and features of a novel human gene, MATH2.1
123570742002Cloning, chromosome localization and features of a novel human gene, MATH2.1

Citation

Dessen P

NEUROD6 (neuronal differentiation 6)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/70807/neurod6-(neuronal-differentiation-6)