NIF3L1 (NGG1 interacting factor 3 like 1)

2014-11-01  

Identity

HGNC
NIF3L1
LOCATION
2q33.1
LOCUSID
60491
ALIAS
ALS2CR1,CALS-7,MDS015

Other Information

Locus ID:

NCBI: 60491
MIM: 605778
HGNC: 13390
Ensembl: ENSG00000196290

Variants:

dbSNP: 60491
ClinVar: 60491
TCGA: ENSG00000196290
COSMIC: NIF3L1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000196290ENST00000359683Q9GZT8
ENSG00000196290ENST00000359683A0A024R3V5
ENSG00000196290ENST00000409020Q9GZT8
ENSG00000196290ENST00000409020A0A024R3V7
ENSG00000196290ENST00000409129B8ZZI0
ENSG00000196290ENST00000409357Q9GZT8
ENSG00000196290ENST00000409357A0A024R3V7
ENSG00000196290ENST00000409588Q9GZT8
ENSG00000196290ENST00000416651Q6X734
ENSG00000196290ENST00000426253E7EXA3
ENSG00000196290ENST00000436412H7C1A8
ENSG00000196290ENST00000454952C9JN42
ENSG00000196290ENST00000651500Q9GZT8
ENSG00000196290ENST00000651500A0A024R3V7

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.20
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.20

Citation

Dessen P

NIF3L1 (NGG1 interacting factor 3 like 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/70831/nif3l1-(ngg1-interacting-factor-3-like-1)