ODF3 (outer dense fiber of sperm tails 3)

2014-11-01  

Identity

HGNC
ODF3
LOCATION
11p15.5
LOCUSID
113746
ALIAS
CT135,SHIPPO1,TISP50

Other Information

Locus ID:

NCBI: 113746
MIM: 608356
HGNC: 19905
Ensembl: ENSG00000177947

Variants:

dbSNP: 113746
ClinVar: 113746
TCGA: ENSG00000177947
COSMIC: ODF3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000177947ENST00000325113Q96PU9
ENSG00000177947ENST00000342593F8W6Z3
ENSG00000177947ENST00000525282Q96PU9

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
230966892012Expression of splice variants of cancer-testis genes ODF3 and ODF4 in the testis of a prostate cancer patient.6
230966892012Expression of splice variants of cancer-testis genes ODF3 and ODF4 in the testis of a prostate cancer patient.6
118700872002Molecular cloning and characterization of a complementary DNA encoding sperm tail protein SHIPPO 1.22
118700872002Molecular cloning and characterization of a complementary DNA encoding sperm tail protein SHIPPO 1.22

Citation

Dessen P

ODF3 (outer dense fiber of sperm tails 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71095/odf3-(outer-dense-fiber-of-sperm-tails-3)