PCDHGC4 (protocadherin gamma subfamily C, 4)

2014-11-01  

Identity

HGNC
PCDHGC4
LOCATION
5q31.3
LOCUSID
56098
ALIAS
PCDH-GAMMA-C4

Other Information

Locus ID:

NCBI: 56098
MIM: 606305
HGNC: 8717
Ensembl: ENSG00000242419

Variants:

dbSNP: 56098
ClinVar: 56098
TCGA: ENSG00000242419
COSMIC: PCDHGC4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000242419ENST00000306593Q9Y5F7
ENSG00000242419ENST00000610539A0A087WU59
ENSG00000242419ENST00000617094Q9Y5F7
ENSG00000242419ENST00000618371A0A087WUC2

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

Citation

Dessen P

PCDHGC4 (protocadherin gamma subfamily C, 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71754/pcdhgc4-(protocadherin-gamma-subfamily-c-4)