PKD1L3 (polycystin 1 like 3, transient receptor potential channel interacting)

2014-11-01 Affiliation

Identity

HGNC

PKD1L3

LOCATION

16q22.2

LOCUSID

342372

ALIAS

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 342372
MIM: 607895
HGNC: 21716
Ensembl: ENSG00000277481

Variants:

dbSNP: 342372
ClinVar: 342372
TCGA: ENSG00000277481
COSMIC: PKD1L3

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000277481	ENST00000620267	Q7Z443

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Taste transduction	KEGG	ko04742
Taste transduction	KEGG	hsa04742

References

Pubmed ID	Year	Title	Citations
25820328	2015	A novel PKD2L1 C-terminal domain critical for trimerization and channel function.	8
25820328	2015	A novel PKD2L1 C-terminal domain critical for trimerization and channel function.	8
23212381	2012	Molecular mechanism of the assembly of an acid-sensing receptor ion channel complex.	31
23212381	2012	Molecular mechanism of the assembly of an acid-sensing receptor ion channel complex.	31
21883212	2011	Genetic tracing of the gustatory neural pathway originating from Pkd1l3-expressing type III taste cells in circumvallate and foliate papillae.	7
21883212	2011	Genetic tracing of the gustatory neural pathway originating from Pkd1l3-expressing type III taste cells in circumvallate and foliate papillae.	7
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20406802	2010	Activation of polycystic kidney disease-2-like 1 (PKD2L1)-PKD1L3 complex by acid in mouse taste cells.	27
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20406802	2010	Activation of polycystic kidney disease-2-like 1 (PKD2L1)-PKD1L3 complex by acid in mouse taste cells.	27
12782129	2003	Identification of two novel polycystic kidney disease-1-like genes in human and mouse genomes.	31
12782129	2003	Identification of two novel polycystic kidney disease-1-like genes in human and mouse genomes.	31

Citation

Dessen P

PKD1L3 (polycystin 1 like 3, transient receptor potential channel interacting)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71937/pkd1l3-(polycystin-1-like-3-transient-receptor-potential-channel-interacting)