PODNL1 (podocan like 1)

2014-11-01  

Identity

HGNC
PODNL1
LOCATION
19p13.12
LOCUSID
79883
ALIAS
SLRR5B

Other Information

Locus ID:

NCBI: 79883
HGNC: 26275
Ensembl: ENSG00000132000

Variants:

dbSNP: 79883
ClinVar: 79883
TCGA: ENSG00000132000
COSMIC: PODNL1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000132000ENST00000254320B7Z3M0
ENSG00000132000ENST00000339560A0A2U3TZJ2
ENSG00000132000ENST00000538371Q6PEZ8
ENSG00000132000ENST00000538517Q6PEZ8
ENSG00000132000ENST00000585607K7EMV0
ENSG00000132000ENST00000586075K7ER84
ENSG00000132000ENST00000587458K7EPR1
ENSG00000132000ENST00000587954K7ESB1
ENSG00000132000ENST00000588764K7EJ07
ENSG00000132000ENST00000588872K7EPI2
ENSG00000132000ENST00000591353K7ERE6

Expression (GTEx)

0
5
10
15
20
25
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
348304542021PODNL1 Methylation Serves as a Prognostic Biomarker and Associates with Immune Cell Infiltration and Immune Checkpoint Blockade Response in Lower-Grade Glioma.6
348304542021PODNL1 Methylation Serves as a Prognostic Biomarker and Associates with Immune Cell Infiltration and Immune Checkpoint Blockade Response in Lower-Grade Glioma.6

Citation

Dessen P

PODNL1 (podocan like 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72040/podnl1-(podocan-like-1)