PPP1R17 (protein phosphatase 1 regulatory subunit 17)

2014-11-01 Affiliation

Identity

HGNC

PPP1R17

LOCATION

7p14.3

LOCUSID

10842

ALIAS

C7orf16,GSBS

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 10842
MIM: 604088
HGNC: 16973
Ensembl: ENSG00000106341

Variants:

dbSNP: 10842
ClinVar: 10842
TCGA: ENSG00000106341
COSMIC: PPP1R17

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000106341	ENST00000342032	O96001
ENSG00000106341	ENST00000342032	A0A090N8N7
ENSG00000106341	ENST00000409146	O96001

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Long-term depression	KEGG	ko04730
Long-term depression	KEGG	hsa04730

Protein levels (Protein atlas)

Not detected

Low

Medium

High

cerebral cortex

cerebellum

hippocampus

caudate

hypothalamus

thyroid gland

parathyroid gland

adrenal gland

nasopharynx

bronchus

lung

oral mucosa

salivary gland

esophagus

stomach 1

stomach 2

duodenum

small intestine

colon

rectum

liver

gallbladder

pancreas

kidney

urinary bladder

testis

epididymis

seminal vesicle

prostate

vagina

ovary

fallopian tube

endometrium 1

endometrium 2

cervix, uterine

placenta

breast

heart muscle

smooth muscle

skeletal muscle

soft tissue 1

soft tissue 2

adipose tissue

skin 1

skin 2

appendix

spleen

lymph node

tonsil

bone marrow

References

Pubmed ID	Year	Title	Citations
22340725	2012	G-substrate: the cerebellum and beyond.	5
22340725	2012	G-substrate: the cerebellum and beyond.	5
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
12955585	2003	A promoter SNP (-1323T>C) in G-substrate gene (GSBS) correlates with hypercholesterolemia.	5
12955585	2003	A promoter SNP (-1323T>C) in G-substrate gene (GSBS) correlates with hypercholesterolemia.	5
12955585	2003	A promoter SNP (-1323T>C) in G-substrate gene (GSBS) correlates with hypercholesterolemia.	5
12955585	2003	A promoter SNP (-1323T>C) in G-substrate gene (GSBS) correlates with hypercholesterolemia.	5

Citation

Dessen P

PPP1R17 (protein phosphatase 1 regulatory subunit 17)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72142/ppp1r17-(protein-phosphatase-1-regulatory-subunit-17)