RPUSD1 (RNA pseudouridine synthase domain containing 1)

2014-11-01  

Identity

HGNC
RPUSD1
LOCATION
16p13.3
LOCUSID
113000
ALIAS
C16orf40,RLUCL
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 113000
HGNC: 14173
Ensembl: ENSG00000007376

Variants:

dbSNP: 113000
ClinVar: 113000
TCGA: ENSG00000007376
COSMIC: RPUSD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000007376ENST00000007264Q9UJJ7
ENSG00000007376ENST00000561734Q9UJJ7
ENSG00000007376ENST00000562070H3BVD0
ENSG00000007376ENST00000563560H3BRG3
ENSG00000007376ENST00000565377H3BSG4
ENSG00000007376ENST00000565503H3BS55
ENSG00000007376ENST00000565809H3BUN6
ENSG00000007376ENST00000567114H3BQN8
ENSG00000007376ENST00000567283H3BU91
ENSG00000007376ENST00000569601H3BMZ6

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

RPUSD1 (RNA pseudouridine synthase domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72881/rpusd1-(rna-pseudouridine-synthase-domain-containing-1)