RPUSD3 (RNA pseudouridine synthase D3)

2014-11-01  

Identity

HGNC
RPUSD3
LOCATION
3p25.3
LOCUSID
285367
ALIAS
-

Other Information

Locus ID:

NCBI: 285367
MIM: 617759
HGNC: 28437
Ensembl: ENSG00000156990

Variants:

dbSNP: 285367
ClinVar: 285367
TCGA: ENSG00000156990
COSMIC: RPUSD3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000156990ENST00000383820Q6P087
ENSG00000156990ENST00000418713H7C454
ENSG00000156990ENST00000423108H7C2C3
ENSG00000156990ENST00000424438C9JM75
ENSG00000156990ENST00000427174H7C1H7
ENSG00000156990ENST00000433535Q6P087
ENSG00000156990ENST00000433555H7C0R9
ENSG00000156990ENST00000433972H7C0K7
ENSG00000156990ENST00000451405H7C0K9

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

RPUSD3 (RNA pseudouridine synthase D3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72883/rpusd3-(rna-pseudouridine-synthase-d3)