SDR39U1 (short chain dehydrogenase/reductase family 39U member 1)

2014-11-01  

Identity

HGNC
SDR39U1
LOCATION
14q12
LOCUSID
56948
ALIAS
C14orf124,HCDI

Other Information

Locus ID:

NCBI: 56948
MIM: 616162
HGNC: 20275
Ensembl: ENSG00000100445

Variants:

dbSNP: 56948
ClinVar: 56948
TCGA: ENSG00000100445
COSMIC: SDR39U1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100445ENST00000399395Q9NRG7
ENSG00000100445ENST00000538105F6RWC2
ENSG00000100445ENST00000553343G3V4Z0
ENSG00000100445ENST00000553930G3V5T1
ENSG00000100445ENST00000554698Q86TZ5
ENSG00000100445ENST00000555225G3V451
ENSG00000100445ENST00000555355G3V2Z6
ENSG00000100445ENST00000555365G3V4N6
ENSG00000100445ENST00000556249H0YJ71
ENSG00000100445ENST00000556523G3V3J5

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

Citation

Dessen P

SDR39U1 (short chain dehydrogenase/reductase family 39U member 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73074/sdr39u1-(short-chain-dehydrogenase-reductase-family-39u-member-1)