SEC16B (SEC16 homolog B, endoplasmic reticulum export factor)

2014-11-01 Affiliation

Identity

HGNC

SEC16B

LOCATION

1q25.2

LOCUSID

89866

ALIAS

LZTR2,PGPR-p117,RGPR,RGPR-p117,SEC16S

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 89866
MIM: 612855
HGNC: 30301
Ensembl: ENSG00000254154

Variants:

dbSNP: 89866
ClinVar: 89866
TCGA: ENSG00000254154
COSMIC: SEC16B

RNA/Proteins

Pathways

Pathway	Source	External ID
Metabolism of proteins	REACTOME	R-HSA-392499
Post-translational protein modification	REACTOME	R-HSA-597592
Asparagine N-linked glycosylation	REACTOME	R-HSA-446203
Transport to the Golgi and subsequent modification	REACTOME	R-HSA-948021
ER to Golgi Anterograde Transport	REACTOME	R-HSA-199977
COPII (Coat Protein 2) Mediated Vesicle Transport	REACTOME	R-HSA-204005
Vesicle-mediated transport	REACTOME	R-HSA-5653656
Membrane Trafficking	REACTOME	R-HSA-199991

References

Pubmed ID	Year	Title	Citations
35295960	2022	Associations between Gene-Gene Interaction and Overweight/Obesity of 12-Month-Old Chinese Infants.	0
35295960	2022	Associations between Gene-Gene Interaction and Overweight/Obesity of 12-Month-Old Chinese Infants.	0
33958541	2021	Female-Specific Susceptibility Locus in BOC and SEC16B are Associated with Adolescent Idiopathic Scoliosis.	2
33958541	2021	Female-Specific Susceptibility Locus in BOC and SEC16B are Associated with Adolescent Idiopathic Scoliosis.	2
30026463	2018	Genetic variants in SEC16B are associated with body composition in black South Africans.	15
30026463	2018	Genetic variants in SEC16B are associated with body composition in black South Africans.	15
27005443	2017	Validation of obesity susceptibility loci identified by genome-wide association studies in early childhood in South Brazilian children.	12
27005443	2017	Validation of obesity susceptibility loci identified by genome-wide association studies in early childhood in South Brazilian children.	12
25637721	2015	Genetic variations in SEC16B, MC4R, MAP2K5 and KCTD15 were associated with childhood obesity and interacted with dietary behaviors in Chinese school-age population.	22
25637721	2015	Genetic variations in SEC16B, MC4R, MAP2K5 and KCTD15 were associated with childhood obesity and interacted with dietary behaviors in Chinese school-age population.	22
23121087	2013	Sex-dependent associations of genetic variants identified by GWAS with indices of adiposity and obesity risk in a Chinese children population.	12
23121087	2013	Sex-dependent associations of genetic variants identified by GWAS with indices of adiposity and obesity risk in a Chinese children population.	12
21768384	2011	Sec16B is involved in the endoplasmic reticulum export of the peroxisomal membrane biogenesis factor peroxin 16 (Pex16) in mammalian cells.	37
22355596	2011	Characterization of human Sec16B: indications of specialized, non-redundant functions.	12
21768384	2011	Sec16B is involved in the endoplasmic reticulum export of the peroxisomal membrane biogenesis factor peroxin 16 (Pex16) in mammalian cells.	37

Citation

Dessen P

SEC16B (SEC16 homolog B, endoplasmic reticulum export factor)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73085/sec16b-(sec16-homolog-b-endoplasmic-reticulum-export-factor)

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