Identity
HGNC
LOCATION
3p21.31
LOCUSID
ALIAS
IMINO,SIT1,XT3,Xtrp3
FUSION GENES
Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool
Other Information
Locus ID:
NCBI: 54716
MIM: 605616
HGNC: 30927
Ensembl: ENSG00000163817
Variants:
dbSNP: 54716
ClinVar: 54716
TCGA: ENSG00000163817
COSMIC: SLC6A20
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000163817 | ENST00000353278 | Q9NP91 |
| ENSG00000163817 | ENST00000358525 | Q9NP91 |
| ENSG00000163817 | ENST00000413781 | C9JIN6 |
| ENSG00000163817 | ENST00000456124 | B7ZLW4 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 33619245 | 2021 | Genome and epigenome editing identify CCR9 and SLC6A20 as target genes at the 3p21.31 locus associated with severe COVID-19. | 28 |
| 34425859 | 2021 | Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus. | 32 |
| 34969185 | 2021 | SIT1 transporter as a potential novel target in treatment of COVID-19. | 4 |
| 33619245 | 2021 | Genome and epigenome editing identify CCR9 and SLC6A20 as target genes at the 3p21.31 locus associated with severe COVID-19. | 28 |
| 34425859 | 2021 | Integrative approach identifies SLC6A20 and CXCR6 as putative causal genes for the COVID-19 GWAS signal in the 3p21.31 locus. | 32 |
| 34969185 | 2021 | SIT1 transporter as a potential novel target in treatment of COVID-19. | 4 |
| 31358688 | 2019 | Associations of SLC6A20 genetic polymorphisms with Hirschsprung's disease in a Southern Chinese population. | 7 |
| 31358688 | 2019 | Associations of SLC6A20 genetic polymorphisms with Hirschsprung's disease in a Southern Chinese population. | 7 |
| 30160974 | 2018 | Intestinal IMINO transporter SIT1 is not expressed in human newborns. | 7 |
| 30160974 | 2018 | Intestinal IMINO transporter SIT1 is not expressed in human newborns. | 7 |
| 26049783 | 2016 | Association Analysis of SLC6A20 Polymorphisms With Hirschsprung Disease. | 4 |
| 26049783 | 2016 | Association Analysis of SLC6A20 Polymorphisms With Hirschsprung Disease. | 4 |
| 25534429 | 2015 | Human intestine luminal ACE2 and amino acid transporter expression increased by ACE-inhibitors. | 196 |
| 25534429 | 2015 | Human intestine luminal ACE2 and amino acid transporter expression increased by ACE-inhibitors. | 196 |
| 24958070 | 2014 | A genetic variant in SLC6A20 is associated with Type 2 diabetes in white-European and Chinese populations. | 5 |
Citation
Dessen P
SLC6A20 (solute carrier family 6 member 20)
Atlas Genet Cytogenet Oncol Haematol. 2014-11-01
Online version: http://atlasgeneticsoncology.org/gene/73476/deep-insight-explorer/
