Identity
HGNC
LOCATION
9q34.3
LOCUSID
ALIAS
PTFalpha,SNAP190
FUSION GENES
Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool
Other Information
Locus ID:
NCBI: 6621
MIM: 602777
HGNC: 11137
Ensembl: ENSG00000165684
Variants:
dbSNP: 6621
ClinVar: 6621
TCGA: ENSG00000165684
COSMIC: SNAPC4
RNA/Proteins
| Gene ID | Transcript ID | Uniprot |
|---|---|---|
| ENSG00000165684 | ENST00000298532 | Q5SXM2 |
| ENSG00000165684 | ENST00000298532 | A0A024R8F4 |
| ENSG00000165684 | ENST00000637388 | A0A1B0GUB4 |
Expression (GTEx)
Pathways
Protein levels (Protein atlas)
References
| Pubmed ID | Year | Title | Citations |
|---|---|---|---|
| 36965478 | 2023 | Bi-allelic SNAPC4 variants dysregulate global alternative splicing and lead to neuroregression and progressive spastic paraparesis. | 1 |
| 36965478 | 2023 | Bi-allelic SNAPC4 variants dysregulate global alternative splicing and lead to neuroregression and progressive spastic paraparesis. | 1 |
| 26590821 | 2016 | Determination of IL1 R2, ANTXR2, CARD9, and SNAPC4 single nucleotide polymorphisms in Iranian patients with ankylosing spondylitis. | 10 |
| 26590821 | 2016 | Determination of IL1 R2, ANTXR2, CARD9, and SNAPC4 single nucleotide polymorphisms in Iranian patients with ankylosing spondylitis. | 10 |
| 24334645 | 2014 | Evidence for genetic association of CARD9 and SNAPC4 with ankylosing spondylitis in a Chinese Han population. | 10 |
| 24334645 | 2014 | Evidence for genetic association of CARD9 and SNAPC4 with ankylosing spondylitis in a Chinese Han population. | 10 |
| 20237496 | 2010 | New genetic associations detected in a host response study to hepatitis B vaccine. | 37 |
| 20379614 | 2010 | Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. | 78 |
| 20463747 | 2010 | Elucidating the chromosome 9 association with AS; CARD9 is a candidate gene. | 26 |
| 20237496 | 2010 | New genetic associations detected in a host response study to hepatitis B vaccine. | 37 |
| 20379614 | 2010 | Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. | 78 |
| 20463747 | 2010 | Elucidating the chromosome 9 association with AS; CARD9 is a candidate gene. | 26 |
| 17670747 | 2007 | The protein kinase CK2 phosphorylates SNAP190 to negatively regulate SNAPC DNA binding and human U6 transcription by RNA polymerase III. | 8 |
| 17670747 | 2007 | The protein kinase CK2 phosphorylates SNAP190 to negatively regulate SNAPC DNA binding and human U6 transcription by RNA polymerase III. | 8 |
| 15955816 | 2005 | Cooperation between small nuclear RNA-activating protein complex (SNAPC) and TATA-box-binding protein antagonizes protein kinase CK2 inhibition of DNA binding by SNAPC. | 3 |
Citation
Dessen P
SNAPC4 (small nuclear RNA activating complex polypeptide 4)
Atlas Genet Cytogenet Oncol Haematol. 2014-11-01
Online version: http://atlasgeneticsoncology.org/gene/73604/snapc4-(small-nuclear-rna-activating-complex-polypeptide-4)
