SPATA33 (spermatogenesis associated 33)

2014-11-01  

Identity

HGNC
SPATA33
LOCATION
16q24.3
LOCUSID
124045
ALIAS
C16orf55
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 124045
MIM: 615409
HGNC: 26463
Ensembl: ENSG00000167523

Variants:

dbSNP: 124045
ClinVar: 124045
TCGA: ENSG00000167523
COSMIC: SPATA33

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000167523ENST00000301031Q96N06
ENSG00000167523ENST00000457689J3KSB2
ENSG00000167523ENST00000564238J3KS00
ENSG00000167523ENST00000565890H3BQG0
ENSG00000167523ENST00000566204J3KRC8
ENSG00000167523ENST00000567827H3BSG8
ENSG00000167523ENST00000568929J3KS58
ENSG00000167523ENST00000579310Q96N06
ENSG00000167523ENST00000611218A0A087WYH0

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
300980562018Gene alterations and expression spectrum of SPATA33 in nonobstructive azoospermic Iranian men.2
300980562018Gene alterations and expression spectrum of SPATA33 in nonobstructive azoospermic Iranian men.2

Citation

Dessen P

SPATA33 (spermatogenesis associated 33)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74137/spata33-(spermatogenesis-associated-33)