SPATS2 (spermatogenesis associated serine rich 2)

2014-11-01  

Identity

HGNC
SPATS2
LOCATION
12q13.12
LOCUSID
65244
ALIAS
Nbla00526,P59SCR,SCR59,SPATA10
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 65244
MIM: 611667
HGNC: 18650
Ensembl: ENSG00000123352

Variants:

dbSNP: 65244
ClinVar: 65244
TCGA: ENSG00000123352
COSMIC: SPATS2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000123352ENST00000321898Q86XZ4
ENSG00000123352ENST00000321898A0A024R101
ENSG00000123352ENST00000547865F8VVF0
ENSG00000123352ENST00000548377A0A0G2JL58
ENSG00000123352ENST00000548654A0A0G2JL58
ENSG00000123352ENST00000548710F8VXP9
ENSG00000123352ENST00000548777F8VX46
ENSG00000123352ENST00000549045F8VX66
ENSG00000123352ENST00000549298F8W1X1
ENSG00000123352ENST00000549412F8VS10
ENSG00000123352ENST00000549538F8VZS5
ENSG00000123352ENST00000550643F8W128
ENSG00000123352ENST00000550997F8VXB3
ENSG00000123352ENST00000551540F8VRH4
ENSG00000123352ENST00000552171A0A0G2JL06
ENSG00000123352ENST00000552918Q86XZ4
ENSG00000123352ENST00000552918A0A024R101
ENSG00000123352ENST00000553127Q86XZ4
ENSG00000123352ENST00000553127A0A024R101

Expression (GTEx)

0
5
10
15
20
25
30
35
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
366317502023SPATS2 is correlated with cell cycle progression and immune cells infiltration in hepatocellular carcinoma.1
366317502023SPATS2 is correlated with cell cycle progression and immune cells infiltration in hepatocellular carcinoma.1
350774782022SPATS2 is positively activated by long noncoding RNA SNHG5 via regulating DNMT3a expression to promote hepatocellular carcinoma progression.3
350774782022SPATS2 is positively activated by long noncoding RNA SNHG5 via regulating DNMT3a expression to promote hepatocellular carcinoma progression.3
321187242020Comprehensive evaluation of SPATS2 expression and its prognostic potential in liver cancer.10
330371802020SPATS2, negatively regulated by miR-145-5p, promotes hepatocellular carcinoma progression through regulating cell cycle.17
321187242020Comprehensive evaluation of SPATS2 expression and its prognostic potential in liver cancer.10
330371802020SPATS2, negatively regulated by miR-145-5p, promotes hepatocellular carcinoma progression through regulating cell cycle.17
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.78

Citation

Dessen P

SPATS2 (spermatogenesis associated serine rich 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74151/spats2-(spermatogenesis-associated-serine-rich-2)