SUMO4 (small ubiquitin like modifier 4)

2014-11-01  

Identity

HGNC
LOCATION
6q25.1
LOCUSID
ALIAS
IDDM5,SMT3H4,SUMO-4,dJ281H8.4

Other Information

Locus ID:

NCBI: 387082
MIM: 608829
HGNC: 21181
Ensembl: ENSG00000177688

Variants:

dbSNP: 387082
ClinVar: 387082
TCGA: ENSG00000177688
COSMIC: SUMO4

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000177688ENST00000326669Q6EEV6

Expression (GTEx)

0
1
2

Pathways

PathwaySourceExternal ID
RNA transportKEGGko03013
RNA transportKEGGhsa03013
Nuclear pore complexKEGGhsa_M00427
Nuclear pore complexKEGGM00427
Fluid shear stress and atherosclerosisKEGGko05418
Fluid shear stress and atherosclerosisKEGGhsa05418

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA447247liver transplantationDiseaseClinicalAnnotationassociatedPK28941036
PA451578tacrolimusChemicalClinicalAnnotationassociatedPK28941036

References

Pubmed IDYearTitleCitations
370666952023The association of five polymorphisms with diabetic retinopathy in a Chinese population.0
370666952023The association of five polymorphisms with diabetic retinopathy in a Chinese population.0
355033742022A SUMO4 initiator codon variant in amyotrophic lateral sclerosis reduces SUMO4 expression and alters stress granule dynamics.2
355033742022A SUMO4 initiator codon variant in amyotrophic lateral sclerosis reduces SUMO4 expression and alters stress granule dynamics.2
322379922020Small ubiquitin-related modifier (SUMO) 3 and SUMO4 gene polymorphisms in Parkinson's disease.3
322379922020Small ubiquitin-related modifier (SUMO) 3 and SUMO4 gene polymorphisms in Parkinson's disease.3
289410362018Association of donor small ubiquitin-like modifier 4 rs237025 genetic variant with tacrolimus elimination in the early period after liver transplantation.5
289410362018Association of donor small ubiquitin-like modifier 4 rs237025 genetic variant with tacrolimus elimination in the early period after liver transplantation.5
284948382017Association between the SUMO4 M55V Polymorphism and Susceptibility to Type 2 Diabetes Mellitus: A Meta-analysis.2
285451382017SUMO-4: A novel functional candidate in the human placental protein SUMOylation machinery.20
286890372017Association of donor and recipient SUMO4 rs237025 genetic variant with new-onset diabetes mellitus after liver transplantation in a Chinese population.4
284948382017Association between the SUMO4 M55V Polymorphism and Susceptibility to Type 2 Diabetes Mellitus: A Meta-analysis.2
285451382017SUMO-4: A novel functional candidate in the human placental protein SUMOylation machinery.20
286890372017Association of donor and recipient SUMO4 rs237025 genetic variant with new-onset diabetes mellitus after liver transplantation in a Chinese population.4
270558822016SUMO4 163 G>A variation is associated with kidney disease in Indian subjects with type 2 diabetes.1

Citation

Dessen P

SUMO4 (small ubiquitin like modifier 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74375/sumo4-(small-ubiquitin-like-modifier-4)