TM9SF1 (transmembrane 9 superfamily member 1)

2014-11-01  

Identity

HGNC
TM9SF1
LOCATION
14q12
LOCUSID
10548
ALIAS
HMP70,MP70
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10548
HGNC: 11864
Ensembl: ENSG00000100926

Variants:

dbSNP: 10548
ClinVar: 10548
TCGA: ENSG00000100926
COSMIC: TM9SF1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000100926ENST00000261789O15321
ENSG00000100926ENST00000396854O15321
ENSG00000100926ENST00000524835G3V1B9
ENSG00000100926ENST00000525592E9PQY7
ENSG00000100926ENST00000528010E9PJC4
ENSG00000100926ENST00000528669E9PMQ9
ENSG00000100926ENST00000528895E9PL78
ENSG00000100926ENST00000529332E9PJM1
ENSG00000100926ENST00000530468E9PS99
ENSG00000100926ENST00000530563E9PNW2
ENSG00000100926ENST00000532632E9PP24

Expression (GTEx)

0
10
20
30
40
50
60
70
80
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
190298332009High-throughput functional screening for autophagy-related genes and identification of TM9SF1 as an autophagosome-inducing gene.38
190298332009High-throughput functional screening for autophagy-related genes and identification of TM9SF1 as an autophagosome-inducing gene.38

Citation

Dessen P

TM9SF1 (transmembrane 9 superfamily member 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74739/tm9sf1-(transmembrane-9-superfamily-member-1)