TRAFD1 (TRAF-type zinc finger domain containing 1)

2014-11-01  

Identity

HGNC
TRAFD1
LOCATION
12q24.13
LOCUSID
10906
ALIAS
FLN29
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10906
MIM: 613197
HGNC: 24808
Ensembl: ENSG00000135148

Variants:

dbSNP: 10906
ClinVar: 10906
TCGA: ENSG00000135148
COSMIC: TRAFD1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000135148ENST00000257604O14545
ENSG00000135148ENST00000257604A0A024RBK4
ENSG00000135148ENST00000412615O14545
ENSG00000135148ENST00000412615A0A024RBK4
ENSG00000135148ENST00000547063F8VWK2
ENSG00000135148ENST00000548092S4R2Z9
ENSG00000135148ENST00000549358F8VVF3
ENSG00000135148ENST00000552890O14545
ENSG00000135148ENST00000552896F8VNX8

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
366727822022Integrative Multiomics and Regulatory Network Analyses Uncovers the Role of OAS3, TRAFD1, miR-222-3p, and miR-125b-5p in Hepatitis E Virus Infection.4
366727822022Integrative Multiomics and Regulatory Network Analyses Uncovers the Role of OAS3, TRAFD1, miR-222-3p, and miR-125b-5p in Hepatitis E Virus Infection.4
188493412008FLN29 deficiency reveals its negative regulatory role in the Toll-like receptor (TLR) and retinoic acid-inducible gene I (RIG-I)-like helicase signaling pathway.29
188493412008FLN29 deficiency reveals its negative regulatory role in the Toll-like receptor (TLR) and retinoic acid-inducible gene I (RIG-I)-like helicase signaling pathway.29
162216742005FLN29, a novel interferon- and LPS-inducible gene acting as a negative regulator of toll-like receptor signaling.24
162216742005FLN29, a novel interferon- and LPS-inducible gene acting as a negative regulator of toll-like receptor signaling.24

Citation

Dessen P

TRAFD1 (TRAF-type zinc finger domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75101/trafd1-(traf-type-zinc-finger-domain-containing-1)