TRIM39-RPP21 (TRIM39-RPP21 readthrough)

2014-11-01  

Identity

HGNC
TRIM39-RPP21
LOCATION
6p22.1
LOCUSID
202658
ALIAS
TRIM39R

Other Information

Locus ID:

NCBI: 202658
HGNC: 38845
Ensembl: ENSG00000248167

Variants:

dbSNP: 202658
ClinVar: 202658
TCGA: ENSG00000248167
COSMIC: TRIM39-RPP21

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000248167ENST00000623385A0A096LP39

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Adaptive Immune SystemREACTOMER-HSA-1280218
Class I MHC mediated antigen processing & presentationREACTOMER-HSA-983169
Antigen processing: Ubiquitination & Proteasome degradationREACTOMER-HSA-983168

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
237078102013TRIM39R, but not TRIM39B, regulates type I interferon response.8
237078102013TRIM39R, but not TRIM39B, regulates type I interferon response.8
176017972007cGMP-dependent protein kinase I interacts with TRIM39R, a novel Rpp21 domain-containing TRIM protein.6
176017972007cGMP-dependent protein kinase I interacts with TRIM39R, a novel Rpp21 domain-containing TRIM protein.6

Citation

Dessen P

TRIM39-RPP21 (TRIM39-RPP21 readthrough)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75152/trim39-rpp21-(trim39-rpp21-readthrough)