TTC23 (tetratricopeptide repeat domain 23)

2014-11-01  

Identity

HGNC
TTC23
LOCATION
15q26.3
LOCUSID
64927
ALIAS
HCC-8
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 64927
HGNC: 25730
Ensembl: ENSG00000103852

Variants:

dbSNP: 64927
ClinVar: 64927
TCGA: ENSG00000103852
COSMIC: TTC23

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000103852ENST00000262074Q5W5X9
ENSG00000103852ENST00000262074A0A024RC85
ENSG00000103852ENST00000394129Q5W5X9
ENSG00000103852ENST00000394129A0A024RC81
ENSG00000103852ENST00000394132Q5W5X9
ENSG00000103852ENST00000394135Q5W5X9
ENSG00000103852ENST00000434594H7BZG4
ENSG00000103852ENST00000459771Q5W5X9
ENSG00000103852ENST00000459771A0A024RC85
ENSG00000103852ENST00000480371H0YET0
ENSG00000103852ENST00000558078H0YMN1
ENSG00000103852ENST00000558663Q5W5X9
ENSG00000103852ENST00000560235H0YKN9
ENSG00000103852ENST00000560279H0YNH7
ENSG00000103852ENST00000560772H0YN45
ENSG00000103852ENST00000560860H0YM10
ENSG00000103852ENST00000561365H0YNV8

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
215555182011The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle.95
215555182011The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle.95
202009532010Genome-wide pleiotropy of osteoporosis-related phenotypes: the Framingham Study.27
202009532010Genome-wide pleiotropy of osteoporosis-related phenotypes: the Framingham Study.27

Citation

Dessen P

TTC23 (tetratricopeptide repeat domain 23)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75275/ttc23-(tetratricopeptide-repeat-domain-23)