VPS9D1 (VPS9 domain containing 1)

2014-11-01  

Identity

HGNC
VPS9D1
LOCATION
16q24.3
LOCUSID
9605
ALIAS
ATP-BL,ATPBL,C16orf7
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 9605
HGNC: 13526
Ensembl: ENSG00000075399

Variants:

dbSNP: 9605
ClinVar: 9605
TCGA: ENSG00000075399
COSMIC: VPS9D1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000075399ENST00000389386Q9Y2B5
ENSG00000075399ENST00000561976H3BM58
ENSG00000075399ENST00000563798H3BNK1
ENSG00000075399ENST00000565023H3BQI2

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
367625832023Vps9d1 regulates tubular endosome formation through specific activation of Rab22A.0
367625832023Vps9d1 regulates tubular endosome formation through specific activation of Rab22A.0

Citation

Dessen P

VPS9D1 (VPS9 domain containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75641/vps9d1-(vps9-domain-containing-1)