YIF1A (Yip1 interacting factor homolog A, membrane trafficking protein)

2014-11-01  

Identity

HGNC
YIF1A
LOCATION
11q13.2
LOCUSID
10897
ALIAS
54TM,FinGER7,YIF1,YIF1P
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10897
MIM: 611484
HGNC: 16688
Ensembl: ENSG00000174851

Variants:

dbSNP: 10897
ClinVar: 10897
TCGA: ENSG00000174851
COSMIC: YIF1A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000174851ENST00000359461A6NGW1
ENSG00000174851ENST00000376901O95070
ENSG00000174851ENST00000431556C9JST7
ENSG00000174851ENST00000471387E9PP02
ENSG00000174851ENST00000484814E9PK42
ENSG00000174851ENST00000496746E9PS11
ENSG00000174851ENST00000528575E9PIZ0

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Metabolism of proteinsREACTOMER-HSA-392499
Unfolded Protein Response (UPR)REACTOMER-HSA-381119
IRE1alpha activates chaperonesREACTOMER-HSA-381070
XBP1(S) activates chaperone genesREACTOMER-HSA-381038

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
187184662008YIPF5 and YIF1A recycle between the ER and the Golgi apparatus and are involved in the maintenance of the Golgi structure.19
187184662008YIPF5 and YIF1A recycle between the ER and the Golgi apparatus and are involved in the maintenance of the Golgi structure.19
159900862005Human Yip1A specifies the localization of Yif1 to the Golgi apparatus.12
159900862005Human Yip1A specifies the localization of Yif1 to the Golgi apparatus.12

Citation

Dessen P

YIF1A (Yip1 interacting factor homolog A, membrane trafficking protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75808/yif1a-(yip1-interacting-factor-homolog-a-membrane-trafficking-protein)