YIF1B (Yip1 interacting factor homolog B, membrane trafficking protein)

2014-11-01  

Identity

HGNC
YIF1B
LOCATION
19q13.2
LOCUSID
90522
ALIAS
FinGER8,KABAMAS
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 90522
HGNC: 30511
Ensembl: ENSG00000167645

Variants:

dbSNP: 90522
ClinVar: 90522
TCGA: ENSG00000167645
COSMIC: YIF1B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000167645ENST00000329420Q5BJH7
ENSG00000167645ENST00000337679Q5BJH7
ENSG00000167645ENST00000339413Q5BJH7
ENSG00000167645ENST00000392124Q5BJH7
ENSG00000167645ENST00000587039K7EJQ6
ENSG00000167645ENST00000588002K7ERQ0
ENSG00000167645ENST00000589247K7ERY2
ENSG00000167645ENST00000591755Q5BJH7
ENSG00000167645ENST00000591784Q5BJH7
ENSG00000167645ENST00000592246K7EPQ7
ENSG00000167645ENST00000592694Q5BJH7

Expression (GTEx)

0
10
20
30
40
50
60
70
80
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
320060982020Truncating mutations in YIF1B cause a progressive encephalopathy with various degrees of mixed movement disorder, microcephaly, and epilepsy.9
326485802020Prognostic and immune regulating roles of YIF1B in Pan-Cancer: a potential target for both survival and therapy response evaluation.12
331037372020YIF1B mutations cause a post-natal neurodevelopmental syndrome associated with Golgi and primary cilium alterations.8
320060982020Truncating mutations in YIF1B cause a progressive encephalopathy with various degrees of mixed movement disorder, microcephaly, and epilepsy.9
326485802020Prognostic and immune regulating roles of YIF1B in Pan-Cancer: a potential target for both survival and therapy response evaluation.12
331037372020YIF1B mutations cause a post-natal neurodevelopmental syndrome associated with Golgi and primary cilium alterations.8

Citation

Dessen P

YIF1B (Yip1 interacting factor homolog B, membrane trafficking protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75809/yif1b-(yip1-interacting-factor-homolog-b-membrane-trafficking-protein)