YIPF3 (Yip1 domain family member 3)

2014-11-01  

Identity

HGNC
YIPF3
LOCATION
6p21.1
LOCUSID
25844
ALIAS
C6orf109,FinGER3,KLIP1,dJ337H4.3
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 25844
MIM: 609775
HGNC: 21023
Ensembl: ENSG00000137207

Variants:

dbSNP: 25844
ClinVar: 25844
TCGA: ENSG00000137207
COSMIC: YIPF3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000137207ENST00000372422Q9GZM5
ENSG00000137207ENST00000416380D6RA04
ENSG00000137207ENST00000455768D6RBQ1
ENSG00000137207ENST00000460547D6RA04
ENSG00000137207ENST00000490447D6RAY4
ENSG00000137207ENST00000500090H0Y9A1
ENSG00000137207ENST00000503972D6RFI3
ENSG00000137207ENST00000506469E7EQR8
ENSG00000137207ENST00000510102D6RA04
ENSG00000137207ENST00000511831D6RGY8

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
279999942017Functional characterisation of the YIPF protein family in mammalian cells.10
282863052017YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi network-localized Yip domain family proteins, which play a role in the Golgi reassembly and glycan synthesis.9
279999942017Functional characterisation of the YIPF protein family in mammalian cells.10
282863052017YIPF1, YIPF2, and YIPF6 are medial-/trans-Golgi and trans-Golgi network-localized Yip domain family proteins, which play a role in the Golgi reassembly and glycan synthesis.9
217578272011Characterization of YIPF3 and YIPF4, cis-Golgi Localizing Yip domain family proteins.13
217578272011Characterization of YIPF3 and YIPF4, cis-Golgi Localizing Yip domain family proteins.13
124902902002Characterization of a novel hematopoietic marker expressed from early embryonic hematopoietic stem cells to adult mature lineages.2
124902902002Characterization of a novel hematopoietic marker expressed from early embryonic hematopoietic stem cells to adult mature lineages.2

Citation

Dessen P

YIPF3 (Yip1 domain family member 3)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75812/meetings/cancer-prone-explorer/