ZNF678 (zinc finger protein 678)

2014-11-01 Affiliation

Identity

HGNC

ZNF678

LOCATION

1q42.13

LOCUSID

339500

ALIAS

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 339500
HGNC: 28652
Ensembl: ENSG00000181450

Variants:

dbSNP: 339500
ClinVar: 339500
TCGA: ENSG00000181450
COSMIC: ZNF678

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000181450	ENST00000343776	Q5SXM1
ENSG00000181450	ENST00000397097	Q5SXM1
ENSG00000181450	ENST00000440339	B1APK8
ENSG00000181450	ENST00000608949	V9GYU6

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Gene Expression	REACTOME	R-HSA-74160
Generic Transcription Pathway	REACTOME	R-HSA-212436

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20546612	2010	The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature.	28
20846217	2010	Association of linear growth impairment in pediatric Crohn's disease and a known height locus: a pilot study.	10
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	78
20546612	2010	The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature.	28
20846217	2010	Association of linear growth impairment in pediatric Crohn's disease and a known height locus: a pilot study.	10

Citation

Dessen P

ZNF678 (zinc finger protein 678)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76327/case-report-explorer/tumors-explorer/welcome