TRMO (tRNA methyltransferase O)

2016-01-01  

Identity

HGNC
TRMO
LOCATION
9q22.33
LOCUSID
51531
ALIAS
C9orf156,HSPC219,NAP1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 51531
HGNC: 30967
Ensembl: ENSG00000136932

Variants:

dbSNP: 51531
ClinVar: 51531
TCGA: ENSG00000136932
COSMIC: TRMO

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000136932ENST00000375117Q5T112
ENSG00000136932ENST00000375118Q5T114
ENSG00000136932ENST00000375119Q9BU70
ENSG00000136932ENST00000455506Q5T111
ENSG00000136932ENST00000611338Q6Y2L2

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
205831702010Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate.13
205831702010Follow-up association studies of chromosome region 9q and nonsyndromic cleft lip/palate.13
197790222009FOXE1 association with both isolated cleft lip with or without cleft palate, and isolated cleft palate.75
197790222009FOXE1 association with both isolated cleft lip with or without cleft palate, and isolated cleft palate.75

Citation

Dessen P

TRMO (tRNA methyltransferase O)

Atlas Genet Cytogenet Oncol Haematol. 2016-01-01

Online version: http://atlasgeneticsoncology.org/gene/78027/trmo-(trna-methyltransferase-o)