MTREX (Mtr4 exosome RNA helicase)

2018-11-01  

Identity

HGNC
LOCATION
5q11.2
LOCUSID
ALIAS
Dob1,KIAA0052,Mtr4,SKIV2L2,fSAP118

Other Information

Locus ID:

NCBI: 23517
MIM: 618122
HGNC: 18734
Ensembl: ENSG00000039123

Variants:

dbSNP: 23517
ClinVar: 23517
TCGA: ENSG00000039123
COSMIC: MTREX

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000039123ENST00000230640P42285
ENSG00000039123ENST00000505565H0Y8U3
ENSG00000039123ENST00000506750D6REC7
ENSG00000039123ENST00000508716H0YAC4

Pathways

PathwaySourceExternal ID
RNA degradationKEGGko03018
RNA degradationKEGGhsa03018
TRAMP complexKEGGhsa_M00393
TRAMP complexKEGGM00393
Gene ExpressionREACTOMER-HSA-74160
Processing of Capped Intron-Containing Pre-mRNAREACTOMER-HSA-72203
mRNA SplicingREACTOMER-HSA-72172
mRNA Splicing - Major PathwayREACTOMER-HSA-72163
rRNA processingREACTOMER-HSA-72312
Major pathway of rRNA processing in the nucleolus and cytosolREACTOMER-HSA-6791226
rRNA processing in the nucleus and cytosolREACTOMER-HSA-8868773

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
369290082023RNA helicase MTR4 drives tumorigenesis of nasopharyngeal carcinoma by regulating the expression of key cell cycle genes.0
369290082023RNA helicase MTR4 drives tumorigenesis of nasopharyngeal carcinoma by regulating the expression of key cell cycle genes.0
364034842022MTR4 adaptor PICT1 functions in two distinct steps during pre-rRNA processing.0
364034842022MTR4 adaptor PICT1 functions in two distinct steps during pre-rRNA processing.0
334226912021Interactome analysis of the Tudor domain-containing protein SPF30 which associates with the MTR4-exosome RNA-decay machinery under the regulation of AAA-ATPase NVL2.2
338573612021Mtr4 RNA helicase structures and interactions.6
334226912021Interactome analysis of the Tudor domain-containing protein SPF30 which associates with the MTR4-exosome RNA-decay machinery under the regulation of AAA-ATPase NVL2.2
338573612021Mtr4 RNA helicase structures and interactions.6
320248422020MTR4 drives liver tumorigenesis by promoting cancer metabolic switch through alternative splicing.45
323501602020Exploration of Salmonella effector mutant strains on MTR4 and RRP6 degradation.3
324634522020Mapping domains of ARS2 critical for its RNA decay capacity.8
320248422020MTR4 drives liver tumorigenesis by promoting cancer metabolic switch through alternative splicing.45
323501602020Exploration of Salmonella effector mutant strains on MTR4 and RRP6 degradation.3
324634522020Mapping domains of ARS2 critical for its RNA decay capacity.8
308422172019NRDE2 negatively regulates exosome functions by inhibiting MTR4 recruitment and exosome interaction.24

Citation

Dessen P

MTREX (Mtr4 exosome RNA helicase)

Atlas Genet Cytogenet Oncol Haematol. 2018-11-01

Online version: http://atlasgeneticsoncology.org/gene/80523/mtrex-(mtr4-exosome-rna-helicase)