PMS1 (PMS1 postmeiotic segregation increased 1 (S. cerevisiae))

2005-12-01   Enric Domingo  , Simo Schwartz Jr  

Oncologia Molecular i Envelliment, Centre dInvestigacions en Bioqumica i Biologia Molecular (CIBBIM) Hospital Universitari Vall dHebron Passeig Vall dHebron 119-129 Barcelona 08035, Catalonia, Spain

Identity

HGNC
LOCATION
2q32.2
LOCUSID
ALIAS
HNPCC3,MLH2,PMSL1,hPMS1
FUSION GENES

DNA/RNA

Atlas Image
Diagram of the PMS1 gene. Exons are represented by boxes (in scale) transcribed and untranscribed sequences in blue and yellow, with exon numbers on top and number of base pairs at the bottom. Introns are represented by black bars (not in scale) and the number of base pairs indicated. The arrows show the ATG and the stop codons respectively.

Description

The PMS1 gene is composed of 13 exons spanning in a region of 93056 bp.

Transcription

The transcribed mRNA has 3032 bp

Proteins

Description

Amino acids: 932. Molecular Weight: 105830 Daltons. PMS1 is a protein involved in the mismatch repair process after DNA replication.

Function

PMS1 binds to MLH1 to form a heterodimer, although MLH1 can also bind to PMS2 or MLH3. Although MLH1/PMS2 binds to the heteroduplexes MutSa (composed of MSH2 and MSH6) or MutSβ (composed of MSH2 and MSH3), which recognize DNA lesions, it remains to be demonstrated the involvement of the MLH1/PMS1 heterodimer in the mismatch repair process, despite that the heterodimer MLH1/PMS2 is responsible for the recruitment of the proteins needed for the excision and repair synthesis.

Homology

PMS1 is homologue to the bacterial MutL gene and to the Mlh2 gene in yeasts.

Mutations

Germinal

A truncating germline mutation of PMS1 was found in one HNPCC patient. Nevertheless, a MSH2 mutation was found in this family, which was the only one that co-segregated with colon cancer. In addition, no more HNPCC patients have been found with mutations in this gene, and PMS1 -/- mice show no discernible phenotype. So there is no evidence that PMS1 mutations predispose to HNPCC.

Implicated in

Article Bibliography

Pubmed IDLast YearTitleAuthors

Other Information

Locus ID:

NCBI: 5378
MIM: 600258
HGNC: 9121
Ensembl: ENSG00000064933

Variants:

dbSNP: 5378
ClinVar: 5378
TCGA: ENSG00000064933
COSMIC: PMS1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000064933ENST00000342075F8W8L1
ENSG00000064933ENST00000374826Q5XG96
ENSG00000064933ENST00000409593P54277
ENSG00000064933ENST00000409823P54277
ENSG00000064933ENST00000409985E9PC40
ENSG00000064933ENST00000418224Q5FBZ9
ENSG00000064933ENST00000420421C9J4L1
ENSG00000064933ENST00000424307E9PC65
ENSG00000064933ENST00000424766C9JF76
ENSG00000064933ENST00000432292B7ZAA0
ENSG00000064933ENST00000441310P54277
ENSG00000064933ENST00000446877C9JKP0
ENSG00000064933ENST00000447232P54277
ENSG00000064933ENST00000447734Q5FBZ7
ENSG00000064933ENST00000450931Q3BDU3
ENSG00000064933ENST00000452382E9PH88
ENSG00000064933ENST00000618056Q5FBZ4
ENSG00000064933ENST00000624204B7ZAA0
ENSG00000064933ENST00000639501Q3BDU3

Expression (GTEx)

0
5
10
15
20
25
30
35

References

Pubmed IDYearTitleCitations
348070012022Analysis of the MLH1, MLH2, MLH6, PMS2 genes and their correlations with clinical data in rectal mucinous adenocarcinoma.1
348529862022Investigation of discordant sibling pairs from hereditary breast cancer families and analysis of a rare PMS1 variant.0
348070012022Analysis of the MLH1, MLH2, MLH6, PMS2 genes and their correlations with clinical data in rectal mucinous adenocarcinoma.1
348529862022Investigation of discordant sibling pairs from hereditary breast cancer families and analysis of a rare PMS1 variant.0
305900052019Associations of Genetic Variations in Mismatch Repair Genes MSH3 and PMS1 with Acute Adverse Events and Survival in Patients with Rectal Cancer Receiving Postoperative Chemoradiotherapy.7
305900052019Associations of Genetic Variations in Mismatch Repair Genes MSH3 and PMS1 with Acute Adverse Events and Survival in Patients with Rectal Cancer Receiving Postoperative Chemoradiotherapy.7
251626622014Genome-wide association study identifies variants in PMS1 associated with serum ferritin in a Chinese population.4
251626622014Genome-wide association study identifies variants in PMS1 associated with serum ferritin in a Chinese population.4
236081722013The mismatch repair gene hPMS1 (human postmeiotic segregation1) is down regulated in oral squamous cell carcinoma.4
242042932013Dominant mutations in S. cerevisiae PMS1 identify the Mlh1-Pms1 endonuclease active site and an exonuclease 1-independent mismatch repair pathway.44
236081722013The mismatch repair gene hPMS1 (human postmeiotic segregation1) is down regulated in oral squamous cell carcinoma.4
242042932013Dominant mutations in S. cerevisiae PMS1 identify the Mlh1-Pms1 endonuclease active site and an exonuclease 1-independent mismatch repair pathway.44
204961652011Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk.13
204961652011Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk.13
196921682010Genetic susceptibility to distinct bladder cancer subphenotypes.30

Citation

Enric Domingo ; Simo Schwartz Jr

PMS1 (PMS1 postmeiotic segregation increased 1 (S. cerevisiae))

Atlas Genet Cytogenet Oncol Haematol. 2005-12-01

Online version: http://atlasgeneticsoncology.org/gene/345/teaching-explorer/haematological-explorer/gene-fusions-explorer/