KLK6 (kallikrein-related peptidase 6)

2019-04-01   Paraskevi Karousi , Christos K. Kontos , Andreas Scorilas 

Department of Biochemistry and Molecular Biology, National and Kapodistrian University of Athens, Athens, Greece \\\/ ascorilas@biol.uoa.gr

Identity

HGNC
LOCATION
19q13.41
LOCUSID
ALIAS
Bssp,Klk7,PRSS18,PRSS9,SP59,hK6

Abstract

Review on KLK6, with data on DNA, protein, and where the gene is involved.

DNA/RNA

Atlas Image
Graphic illustration of the KLK6 gene. Boxes denote exons and connecting lines represent introns. The coding sequences are colored in green, while 5 and 3 untranslated regions (UTRs) are shown in white. The numbers inside or outside boxes indicate lengths (nt) of exons and introns, respectively, while the numbers in parentheses indicate lengths (aa) of protein isoforms. Arrows mark the position of the start codons (ATG) and asterisks (*) mark the position of the stop codon (TGA). The figure is drawn in scale, except for the introns containing the (//) symbol. For each transcript, the splice variant number, the GenBank accession number and the protein isoform number are shown next to each transcript (Adamopoulos et al., 2017).

Description

The KLK6 gene is located on 19q chromosome, has a total length of 11.043 nt, and consists of 7 exons and 6 introns.

Transcription

KLK6 pre-mRNA is subjected to alternative splicing. Six (6) variants had previously been detected, while another 6 transcripts have recently been identified by our research group (Adamopoulos et al., 2017). Furthermore, one more variant is predicted, based on similarity to 50 ESTs. Each of them has a different exon and intron structure. The main variant (variant A) consists of 7 exons and 6 introns. The first 2 introns do not include coding regions and compose the 5UTR. The other 11 variants range from 3 to 7 exons and 2 to 6 introns, while some of them bare similarity to each other. The structures of all variants are clearly illustrated in Figure 1.

Pseudogene

Not detected so far.

Proteins

Atlas Image
Alignment of 4 out of the 8 isoforms of the KLK6 protein. The signal peptide, glycosylation site, catalytic triad, and disulfide bonds are marked on the main isoform (isoform 1). The other four isoforms that are not presented align only partially with the main isoform.

Description

Eight different isoforms of KLK6 protein have been detected, consisting of 244, 137, 120, 149, 42, 138 277, and 182 amino acid (aa) residues, respectively. The KLK6 gene encodes a single-chain pre-proenzyme, which is enzymatically inactive. After the removal of the signal peptide (16 aa) from the pre-proenzyme, an inactive proKLK is formed and secreted to the extracellular space, where it is finally transformed into the active KLK through further cleavage (Bayani & Diamandis, 2011).

Expression

KLK6 is highly expressed in cerebral cortex, tonsil, spleen, esophagus, kidney, fallopian tube and breast.

Localisation

KLK6 is mainly localized to nucleoplasm, nuclear membrane and cytokinetic bridge.

Function

KLK6 is a serine protease, involved in proteolytic cascades. KLK6 has been suggested to be autoactivated or activate other proKLKs. When activated, serine proteases are usually regulated by binding to serpins (serine protease inhibitors), which prompts to their inactivation. A preference for Arg over Lys in the substrate P1 position and for Ser or Pro in the P2 position is detected in KLK6 substrate. Three amino acid residues (positions: 62, 106, and 197) constitute the catalytic triad in the main protein isoform (isoform 1, 244 aa) that is responsible for serine protease activity. An Asp residue at position 191 suggests a trypsin-like activity, while chymotrypsin activity is suggested by a loop similar to chymotrypsin 3D-structure. However, chymotrypsin activity is rejected by recent studies. KLK6 is activated against amyloid precursor protein, which is associated with Alzheimers disease, myelin basic protein, and casein. Furthermore, it participates in the degradation of extracellular matrix (ECM) proteins, namely fibronectin, laminin, vitronectin, laminin and collagen. It is involved in alpha-synuclein degradation and in the inhibition of its polymerization. This fact demonstrates the potential role of KLK6 in Parkinsons disease. Furthermore, KLK6 plays a role in cancer invasion and metastasis (Bayani & Diamandis, 2011).

Mutations

Note

No mutations have been detected.

Implicated in

Entity name
Gastric cancer
Prognosis
KLK6 is overexpressed in gastric cancer tissues. Elevated expression of KLK6 is linked to lymphatic invasion and unfavorable patient prognosis and may be associated with pericellular proteolysis. KLK6 gene silencing successfully reduces tumor cell proliferation and invasion (Nagahara et al., 2005).
Entity name
Non-Small Cell Lung Cancer (NSCLC)
Prognosis
KLK6 expression is elevated in NSCLC tumor tissue and is involved in NSCLC development and progression. High KLK6 concentration is related to poor survival rates, and patients with KLK6 overexpression are characterized by unfavorable prognosis (Heuzé-Vourch et al., 2009).
Entity name
Ovarian cancer
Prognosis
KLK6 protein expression is elevated in ovarian cancer, in both tumor and surrounding stromal cells. KLK6 is more often overexpressed in serous ovarian carcinoma than in endometrioid and mucinous carcinomas. It has been found to be transcriptionally regulated by hormones; KLK6 represents a downstream molecule by which a hormone-related neoplasm initiates and invades through degradation of the extracellular matrix and interaction with angiogenic factors. Gene amplification is suggested as a possible mechanism of high KLK6 presence in ovarian tumors. KLK6 derived by stromal cells is associated with the aggressive ovarian neoplasm. Unique patterns of N-glycosylation of KLK6 have been found; parts of sialic acid on KLK6 are abundant, almost exclusively, in ovarian cancer cells. KLK6 has been suggested as a prognostic biomarker for ovarian cancer, and is applicable in every stage, including the early one. Furthermore, it can be used in combination with MUC16 (CA-125), KLK10 and KLK13, in a multivariate model with increased prognostic power (Ni et al., 2004; White et al., 2009; Kuzmanov et al., 2009; Seiz et al., 2012).
Entity name
Breast Cancer
Prognosis
In the majority of metastatic breast cancers, KLK6 is deregulated. The mechanism behind this deregulation is genomic DNA methylation. Specifically, KLK6 has a tumor-protective activity against breast cancer, which derives from KLK6 loss-of-function, due to hypermethylation of CpG dinucleotides. On the other hand, overexpression of KLK6 was related to demethylation of the CpG dinucleotides. Modulation of KLK6 expression could serve as a therapeutic target (Pampalakis and Sotiropoulou, 2006).
Entity name
Skin cancer
Prognosis
KLK6 has proved to induce early skin cancer through the development of skin inflammation. Deficiency of KLK6 is linked to the suppression of chemically-induced skin cancer. KLK6 suspends CDH1 (E-cadherin) expression and leads to accumulation of CTNNB1ID: 71> (beta-catenin). Moreover, it is involved in progression of skin cancer and migration of cancer cells in
Entity name
Colorectal cancer (CRC)
Prognosis
KLK6 expression in CRC has been reported to be elevated when a mutation in KRAS oncogene, which is strongly related to CRC, is abundant. Its expression is also increased through caveolin 1 ( CAV1) activity. CAV1 is overexpressed in CRC and acts on the PI3K/AKT pathway, by decreasing the activity of negative regulatory phosphatases, such as PPA1 and PTPA (PP2A). This leads to KLK6 gene overexpression. KLK6 has proved to participate in invasion and KRAS-dependent migration (Henkhaus et al., 2008a). This occurs due to its serine protease-ability to degrade EMC components (collagen, laminin, fibronectin). KLK6 is also involved in proteolytic cascades leading to the activation of certain enzymes which are involved in pericellular proteolysis and subsequently, to tumor invasion. Proteolysis of ECM components leads to disruption of their interaction with cells and is associated with tumor cell growth and malignant transformation. KLK6 serves as a possible indicator in CRC. This is enhanced by the fact that a combined analysis of KLK6 and carcinoembryonic antigen (CEA) in lymph nodes is able to identify CRC patients with high risk of relapse (Henkhaus et al., 2008b; Ohlsson et al., 2012; Petraki et al., 2012).

Bibliography

Pubmed IDLast YearTitleAuthors
292299802017Molecular cloning of novel transcripts of human kallikrein-related peptidases 5, 6, 7, 8 and 9 (KLK5 - KLK9), using Next-generation sequencing.Adamopoulos PG et al
220471442011The physiology and pathobiology of human kallikrein-related peptidase 6 (KLK6).Bayani J et al
186272902008Kallikrein 6 is a mediator of K-RAS-dependent migration of colon carcinoma cells.Henkhaus RS et al
178047332007Kallikrein 6 induces E-cadherin shedding and promotes cell proliferation, migration, and invasion.Klucky B et al
217537812011Expression and function of the kallikrein-related peptidase 6 in the human melanoma microenvironment.Krenzer S et al
190880652009Differential N-glycosylation of kallikrein 6 derived from ovarian cancer cells or the central nervous system.Kuzmanov U et al
162037672005Clinicopathologic and biological significance of kallikrein 6 overexpression in human gastric cancer.Nagahara H et al
194261572009High kallikrein-related peptidase 6 in non-small cell lung cancer cells: an indicator of tumour proliferation and poor prognosis.Nathalie HV et al
153051832004Characterisation of human kallikrein 6/protease M expression in ovarian cancer.Ni X et al
226998262012Lymph node tissue kallikrein-related peptidase 6 mRNA: a progression marker for colorectal cancer.Ohlsson L et al
168007392006Multiple mechanisms underlie the aberrant expression of the human kallikrein 6 gene in breast cancer.Pampalakis G et al
222852222012Evaluation and prognostic significance of human tissue kallikrein-related peptidase 6 (KLK6) in colorectal cancer.Petraki C et al
225055212012Stromal cell-associated expression of kallikrein-related peptidase 6 (KLK6) indicates poor prognosis of ovarian cancer patients.Seiz L et al
200372042009Human kallikrein related peptidases 6 and 13 in combination withCA125 is a more sensitive test for ovarian cancer than CA125 alone.White NM et al

Other Information

Locus ID:

NCBI: 5653
MIM: 602652
HGNC: 6367
Ensembl: ENSG00000167755

Variants:

dbSNP: 5653
ClinVar: 5653
TCGA: ENSG00000167755
COSMIC: KLK6

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000167755ENST00000310157Q92876
ENSG00000167755ENST00000310157A0A024R4J8
ENSG00000167755ENST00000376851Q92876
ENSG00000167755ENST00000376851A0A024R4J8
ENSG00000167755ENST00000391808Q92876
ENSG00000167755ENST00000594641Q92876
ENSG00000167755ENST00000594641A0A024R4J8
ENSG00000167755ENST00000597379Q92876
ENSG00000167755ENST00000599690M0QYA5
ENSG00000167755ENST00000599881Q92876

Expression (GTEx)

0
50
100
150
200
250
300
350
400

References

Pubmed IDYearTitleCitations
129284832003Alpha-synuclein degradation by serine protease neurosin: implication for pathogenesis of synucleinopathies.48
171588872007A potential role for multiple tissue kallikrein serine proteases in epidermal desquamation.43
233081732013Low CSF levels of both α-synuclein and the α-synuclein cleaving enzyme neurosin in patients with synucleinopathy.38
119837032002Crystal structure and biochemical characterization of human kallikrein 6 reveals that a trypsin-like kallikrein is expressed in the central nervous system.37
225084892013Lentivirus mediated delivery of neurosin promotes clearance of wild-type α-synuclein and reduces the pathology in an α-synuclein model of LBD.35
120233172002Activity of a newly identified serine protease in CNS demyelination.34
128782032003Characterization of the enzymatic activity of human kallikrein 6: Autoactivation, substrate specificity, and regulation by inhibitors.34
204033932010Extracellular neurosin degrades α-synuclein in cultured cells.32
155577572004Human kallikrein 6 degrades extracellular matrix proteins and may enhance the metastatic potential of tumour cells.30
163219732006Substrate specificity of human kallikrein 6: salt and glycosaminoglycan activation effects.29

Citation

Paraskevi Karousi ; Christos K. Kontos ; Andreas Scorilas

KLK6 (kallikrein-related peptidase 6)

Atlas Genet Cytogenet Oncol Haematol. 2019-04-01

Online version: http://atlasgeneticsoncology.org/gene/41086/klk6-(kallikrein-related-peptidase-6)