LGALS3 (lectin, galactoside-binding, soluble, 3)

2010-10-01   Pratima Nangia-Makker  , Vitaly Balan  , Avraham Raz  

Karmanos Cancer Institute, Wayne State University, 110 E Warren Avenue, Detroit, MI 48201, USA

Identity

HGNC
LOCATION
14q22.3
LOCUSID
ALIAS
CBP35,GAL3,GALBP,GALIG,L31,LGALS2,MAC2
FUSION GENES

DNA/RNA

Description

Size 16277 bases.
Consists of at least 6 exons.

Transcription

Two transcription initiation sites were identified in human LGALS3. These transcripts arise from an internal gene embedded within LGALS3, named galig (galectin-3 internal gene) (Barondes et al., 1994; Hirayabashi and Kasai, 1998).

Pseudogene

None.

Proteins

Description

250 amino acids; 26152 Da; The initial 12 amino acid N-terminal peptide sequence also called small N-terminal, precede the proline/glycin-rich repetitive domain consisting of about 100 amino acids. C-terminal consists of about 130 amino acids encoding carbohydrate-binding domain. Galectin-3 is the only chimeric protein among a family of 15 galectins known so far (Hirayabashi and Kasai, 1998).

Localisation

In adults, galectin-3 is ubiquitously expressed and localizes to the extracellular matrix, the cytoplasm and the nucleus (Hirayabashi and Kasai, 1998; Krzeslak and Lipinska, 2004).

Function

Galectin-3 is a carbohydrate-binding protein: a characteristic that it shares with other members of galectin family. The collagen alpha like N terminal sequence can be cleaved by Matrix metalloproteinases and the cleavage results in an enhanced binding efficiency to carbohydrates (Ochieng et al.,1994; Shekhar et al., 2004). Intra-cellularly it functions as an anti-apototic protein because of the presence of Asp-Trp-Gly-Arg (NWGR) motif at the C terminal (Akahani et al., 1997; Nakahara et al., 2005; Yang et al., 1996). NWGR is designated as the anti-death motif characteristic of the BCL2 family. Extra-cellular protein however, functions as a pro-apoptotic entity on T cells (Fukumori et al., 2003). Galectin-3 has also exhibited pro-angiogenic properties (Nangia-Makker et al., 2000).

Homology

N-terminal domain has 33.5% identity with collagen alpha1 (II) chain of bovine cartilage, so it is also designated as a collagen-like N-terminal domain. The C-terminal domain of galectin-3, forming a globular structure, accommodates whole carbohydrate-binding site, and is very similar to CRD of other lectins.

Mutations

Germinal

P64H (rs4644), T98P (rs4652), R183K (rs10148371).
Functional germline mutation in the galectin-3 gene at position 191 (rs4644) substituting proline with histidine (P64H), which results in susceptibility to matrix metalloproteinase cleavage and acquisition of resistance to drug-induced apoptosis. This substitution correlates with incidence of breast cancer and racial disparity (Balan et al., 2008). Rs10148371 is localized in the anti-apoptotic motif NWGR.

Somatic

None.

Implicated in

Entity name
Various cancers
Disease
Over-expression of galectin-3 was reported in the metastatic cell lines compared to their non-metastatic counterparts. Galectin-3 concentrations were significantly higher in the serum of patients with melanoma and breast cancer compared to the normal controls. In the tumor tissues, upregulation and/or redistribution of galectin-3 was shown in thyroid, colon, breast, gastric, prostate, melanoma and head and neck cancers, however, the data in some cases are not consistent (Dumic et al., 2006; Yang et al., 2008). Recently, it was reported in breast and prostate cancer that after cleavage by Matrix metalloproteases galectin-3 is not recognized by the commonly used monoclonal antibody TIB166 (Nangia-Makker et al., 2007; Wang et al., 2009), which could explain some of the discrepancy in the earlier reports.
Entity name
Autoimmune disease
Disease
Galectin-3 plays a role in pathogenesis of autoimmune disease. Endogenous protein promotes inflammatory response in asthma, pharmacological application of galectin-3 might suppress it (del Pozo et al., 2002; Zuberi et al., 2004), thus opening a new approach for future treatment of the disease. In Crohns disease and systemic lupus, erythematosus and polymyositis/dermatomyositis anti-galectin-3 auto-antibodies were identified (Jensen-Jarolim et al., 2001; Lim et al., 2002). In sera and synovial fluid from rheumatoid arthritis (RA) patients, galectin-3 level was found to be elevated (Ohshima et al., 2003).
Prognosis
Galectin-3 is differentially expressed in thyroid carcinoma compared with benign and normal thyroid specimens, suggesting that Galectin-3 is a good diagnostic marker for thyroid cancer (Chiu et al., 2010).
Oncogenesis
Galectin-3 is not an oncogene, but helps in cancer progression once it is initiated.

Article Bibliography

Pubmed IDLast YearTitleAuthors
93937481997Galectin-3: a novel antiapoptotic molecule with a functional BH1 (NWGR) domain of Bcl-2 family.Akahani S et al
190748692008Racial disparity in breast cancer and functional germ line mutation in galectin-3 (rs4644): a pilot study.Balan V et al
80636921994Galectins. Structure and function of a large family of animal lectins.Barondes SH et al
203639212010Diagnostic utility of galectin-3 in thyroid cancer.Chiu CG et al
164786492006Galectin-3: an open-ended story.Dumic J et al
146789892003CD29 and CD7 mediate galectin-3-induced type II T-cell apoptosis.Fukumori T et al
158981881998Evolution of animal lectins.Hirabayashi J et al
117200072001Anti-Galectin-3 IgG autoantibodies in patients with Crohn's disease characterized by means of phage display peptide libraries.Jensen-Jarolim E et al
152138112004Galectin-3 as a multifunctional protein.Krześlak A et al
120837772002Identification of autoantibodies associated with systemic lupus erythematosus.Lim Y et al
158438882005On the role of galectin-3 in cancer apoptosis.Nakahara S et al
180898062007Galectin-3 cleavage: a novel surrogate marker for matrix metalloproteinase activity in growing breast cancers.Nangia-Makker P et al
79478211994Galectin-3 is a novel substrate for human matrix metalloproteinases-2 and -9.Ochieng J et al
145580842003Galectin 3 and its binding protein in rheumatoid arthritis.Ohshima S et al
155794372004Alterations in galectin-3 expression and distribution correlate with breast cancer progression: functional analysis of galectin-3 in breast epithelial-endothelial interactions.Shekhar MP et al
192865702009Regulation of prostate cancer progression by galectin-3.Wang Y et al
86928881996Expression of galectin-3 modulates T-cell growth and apoptosis.Yang RY et al
185495222008Galectins: structure, function and therapeutic potential.Yang RY et al
155794472004Critical role for galectin-3 in airway inflammation and bronchial hyperresponsiveness in a murine model of asthma.Zuberi RI et al
122048732002Gene therapy with galectin-3 inhibits bronchial obstruction and inflammation in antigen-challenged rats through interleukin-5 gene downregulation.del Pozo V et al

Other Information

Locus ID:

NCBI: 3958
MIM: 153619
HGNC: 6563
Ensembl: ENSG00000131981

Variants:

dbSNP: 3958
ClinVar: 3958
TCGA: ENSG00000131981
COSMIC: LGALS3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000131981ENST00000254301P17931
ENSG00000131981ENST00000254301A0A024R693
ENSG00000131981ENST00000553493G3V407
ENSG00000131981ENST00000554715G3V3R6

Expression (GTEx)

0
100
200
300
400
500
600
700

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Innate Immune SystemREACTOMER-HSA-168249
Advanced glycosylation endproduct receptor signalingREACTOMER-HSA-879415
Neutrophil degranulationREACTOMER-HSA-6798695

Protein levels (Protein atlas)

Not detected
Low
Medium
High

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA164712406AntibioticsChemicalClinicalAnnotationassociatedPD25869013
PA444546HypersensitivityDiseaseClinicalAnnotationassociatedPD25869013

References

Pubmed IDYearTitleCitations
378159322024Galectin-3 does not interact with RNA directly.0
379881692024Galectin-3 aggravates microglial activation and tau transmission in tauopathy.1
381514362024Association between galectin-3 and the prognosis of patients with stroke: A meta-analysis of observational studies.0
381728222024Inter-relationships of galectin-3 and NLR family pyrin domain containing 3 inflammasomes with oral lichen planus: a preliminary cross-sectional in vitro study.0
382162662024Circulating Galectin-3 levels in women with polycystic ovary syndrome: A meta-analysis.0
382377652024Cigarette smoke-induced galectin-3 as a diagnostic biomarker and therapeutic target in lung tissue remodeling.1
382516572024The Role of Galectin3, Tubulinβ, and Maspin in Promoting Tumor Budding in Colorectal Carcinoma and Their Clinical Implications.0
383100852024Combination of serum alpha-fetoprotein, PIVKA-Ⅱ and glypican-3 in diagnosis of hepatocellular carcinoma: a meta-analysis.0
383103522024Placental expression quantitative trait loci in an East Asian population.0
383713792024Galectin-3 promotes fibrosis in ovarian endometriosis.0
384385892024Targeting Galectin 3 illuminates its contributions to the pathology of uterine serous carcinoma.0
384718232024Galectin-3, Metabolic Risk, and Incident Heart Failure: The ARIC Study.0
384741412024Biophysical and Structural Characterization of the Interaction between Human Galectin-3 and the Lipopolysaccharide from Pseudomonas aeruginosa.0
384741952024BAP31 Promotes Angiogenesis via Galectin-3 Upregulation in Neuroblastoma.0
385617252024Role of Galectin-3 in intervertebral disc degeneration: an experimental study.0

Citation

Pratima Nangia-Makker ; Vitaly Balan ; Avraham Raz

LGALS3 (lectin, galactoside-binding, soluble, 3)

Atlas Genet Cytogenet Oncol Haematol. 2010-10-01

Online version: http://atlasgeneticsoncology.org/gene/44396/lgals3-(lectin-galactoside-binding-soluble-3)